| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 442673 = | 515 (0.830) | 41 (0.080) | 16/90 | NT | 7.1% | coding (489/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | 442734 = | 656 (1.320) | coding (428/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 196 total aligned reads displayed.
TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 TTGGTTCGCTCTGCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCTATAGC < 1:49646957/68‑1TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:11372187/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:11538514/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:11696665/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:15907887/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:5119025/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:7108264/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:5650244/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:316590/1‑68 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:6262102/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:47924369/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:640726/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:20234358/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:15475248/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:13312470/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:48334297/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:3854819/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:23208281/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC > 1:23039033/1‑67 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:43135076/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:19480456/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:30674538/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:4618477/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:38501430/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:39515078/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:41547233/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCAGCGC > 1:49749883/1‑68 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:31238867/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:47259914/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:24369399/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:21831281/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:10114950/68‑1 CGCGCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:4494337/68‑1 tcgCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGAAAGCGGCGCAGCG < 1:24742273/65‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTATCCGGTGTGTTCGATAGCGGCGCAGCG < 1:21913416/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:5194042/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:41733733/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:50197031/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:30152064/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:12428372/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:19300231/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:821199/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:48749168/67‑1 TCTCCGGCGCTGCCCCGCCGGTGATCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGC < 1:36388912/67‑1 CTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:45488530/68‑1 CTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:5809048/68‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:27785626/67‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:17297372/67‑1 TCCCGCCCTGCGCCGCCGGTGATCGGCTACTGTGCGGTACCCGGTGAGTTCGATAGCGGCGCAGCGCC < 1:40858205/68‑1 atCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGG < 1:35793296/65‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGA < 1:16912757/68‑1 GCGCCGCCGGTGAGCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGA < 1:15257893/68‑1 CGCCGCCGGTGAACGGCTACTGTGCGGTAACCGGGGAGTTCGCTAGCCGCGCAGCGCCGGAGAGCGA < 1:11045683/67‑1 CGCCCCCGGTGATCGGCTCCTGGGCGGAAACCGGGGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGA < 1:28295143/67‑1 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAA > 1:13060038/1‑67 CGCCGGTGATCGGCTACTGTCCGGTACCCCGTGAGTTCGACAGCGGCGCAGCGCCGGAGAGCGAACCA < 1:21395354/68‑1 CGCCGGGGAGCGGCTACTGCGCGGTACCCGGGGAGGTCGATAGCGGCGCAGCGCCGGAGAGCGAACC < 1:1892249/67‑1 GCCGGTCAGCGTCTTCTGTGCGGTAACCGGTGAGTGCGATCGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:2889861/68‑1 CGGCTACTGTGCGGTACCCGGGGAGCTCGACAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:26789959/68‑1 CGGCTACTGGGCGGGACCCGGTGAGGTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:48473102/68‑1 GGCTACTGTGCGGTACCCGGTCAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:46962708/67‑1 GGCTACTGAGCGGTCCCCGGTGCGTGCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:33723338/67‑1 GGCTACTGAGCGGTAACCGGTGAGTGCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:33994727/67‑1 GGCTACAGCGCGGTAACCGGTGAGGGCGAGCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:20214288/67‑1 cCTGTGCGGCAACCGGTGCGGGCGCTAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:14641877/67‑1 ACTGGGCGGTAACCGGTGAGTTCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:3441198/68‑1 GTGCGGTAACCGGCGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACA < 1:32018030/68‑1 TGCGGTAACCGGTGAGCCCGCCCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACA < 1:25081093/67‑1 AACCGGTGAGACCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGC < 1:35223542/68‑1 ACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCG < 1:37309147/68‑1 GGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTT < 1:874693/68‑1 GTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATG < 1:28950920/67‑1 TAGCGGCCCACCGCCGGACAGCGAACCAATCAACGTGCCGTAGACAGTGTGGCGTTTCATGTACAGG < 1:1368976/67‑1 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTTGACAGAGTGGCGTTTAATGTTCACGCga > 1:42800754/1‑66 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:43723942/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:44905538/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:860827/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:37583908/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:1078837/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:21319764/1‑68 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:40854776/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:3767326/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:28760138/67‑1 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:2063323/1‑67 GCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAAC < 1:10299550/68‑1 GCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAA < 1:18796038/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:30948008/67‑1 CGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACA > 1:7728321/1‑54 GCCGGAGAGCGCACCAATCAACGTGCCGTAGACAGAGTGGCGTGTCATGTACCGGCTATAACCGCCG > 1:31321155/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:22371418/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:30327578/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:50626706/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:20491283/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:20477774/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:12775338/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:36222613/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:4649792/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:38854991/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:50020233/1‑67 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:18420463/1‑67 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |