| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 220 (0.360) | 19 (0.040) | 9/92 | NT | 7.7% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 274 (0.540) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 208 total aligned reads displayed.
TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:41961342/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:20309826/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:20896353/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:26431644/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:220202/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:47283906/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:27266293/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:47970379/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:16796843/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:44872646/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:15537596/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:36879589/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:50053462/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:36598456/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:44465709/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:35842110/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:6967872/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:8247709/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACAAGAGAC > 1:23625438/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACCCCCGGTAACGTTGTAAAACCAGAGACGCA > 1:13428612/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAGAACGAGAGACGCA > 1:49961388/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:41169380/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:39025054/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:28363345/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:25741242/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:38311349/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:10123919/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:28613531/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:37885469/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:31540894/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:32270094/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:33685879/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:22193184/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:19590137/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:11747937/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:45824409/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:51129776/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:15770067/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:22343322/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGC < 1:1514426/67‑1 CTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:29380033/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGATAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:8532607/66‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATC < 1:32943021/68‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT < 1:27757687/67‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:17461289/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:6168620/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:35045137/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTGGTAAAACCAGAGACGCA < 1:19399851/66‑1 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:16229084/1‑67 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:17023927/1‑67 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:9475632/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:11076438/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:12063278/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:9383914/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:7365598/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:5669202/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:41286504/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:24355474/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:39298456/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:25040081/67‑1 AAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAA < 1:46606721/68‑1 ACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGGCTCTGGT > 1:16839191/1‑68 ACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAAC > 1:11940793/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:46171626/1‑68 TGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTg > 1:7822832/1‑66 TGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTT > 1:22245391/1‑67 ACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:34924347/1‑67 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:3797279/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:371035/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:5260042/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:43804452/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:51329709/1‑66 GCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCT < 1:10627720/68‑1 ATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG < 1:46342670/68‑1 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACATCGTTACCGGGTGTTCTTTCTCG > 1:41064603/1‑67 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGC < 1:7215746/68‑1 TCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG > 1:10076506/1‑67 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:3169487/68‑1 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:3054619/68‑1 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:6673527/68‑1 CGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACACCGTTACCGGGTGTTCTTTCTCGCCT > 1:36124402/1‑68 GCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTATTTCTCGCCTT > 1:49668854/1‑67 CGACAGGAACCAATTGCCGGATGCGTCTGTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:23135461/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:5572596/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:9338911/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:30308297/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:11695040/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:26908194/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:24250858/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:1721523/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:43103128/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:18899099/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:51058983/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:14571249/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:47460828/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:49307366/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:48700942/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:17716395/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:30758688/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCG > 1:3467224/1‑62 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |