| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 220 (0.360) | 19 (0.040) | 9/92 | NT | 7.7% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 274 (0.540) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 730 total aligned reads displayed.
GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 | gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCa > 1:27805566/1‑68 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:11076438‑M1/67‑1 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:24355474‑M1/67‑1 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:25040081‑M1/67‑1 (MQ=255)gaagtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:47443239‑M1/67‑1 (MQ=255) agtgaagtTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCAtt > 1:16110666/1‑68 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGtt > 1:19024476/1‑65 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTcc < 1:10415722/67‑1 (MQ=255) ttAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTcc < 1:12002917/67‑1 (MQ=255) aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGt < 1:35996301/68‑1 (MQ=255) aaGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGt < 1:100420/68‑1 (MQ=255) gAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTc > 1:47796921/1‑67 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:43103128‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:11695040‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:9338911‑M2/67‑2 (MQ=255) aaaGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg < 1:16861160‑M2/67‑2 (MQ=255) aaGGCGAGAAAGACCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCg > 1:957329‑M2/1‑65 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg < 1:3169487‑M2/68‑6 (MQ=255) ggCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg < 1:3054619‑M2/68‑6 (MQ=255) cGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccgg > 1:15612518‑M2/1‑61 (MQ=255) agaaagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgc < 1:10627720‑M2/68‑10 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcg < 1:3797279‑M2/66‑11 (MQ=255) aagaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCgg < 1:26663754/67‑1 (MQ=255) agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCt > 1:51085035/1‑68 (MQ=255) agaaCACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCt < 1:2340832/68‑1 (MQ=255) acacCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGa < 1:30926809/68‑1 (MQ=255) cccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACg < 1:8528397/68‑1 (MQ=255) ccGTTAACGTTGTAAACCCAGAGACGCATCCGGCATTTGGTTCCTGTCTCCGGATGCGGCTTGAACGc < 1:5854570/68‑1 (MQ=25) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:41508901/68‑1 (MQ=255) ccGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGc < 1:28953111/68‑1 (MQ=255) gTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCTTCTTGCACGCCTT > 1:43675150‑M1/1‑68 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaac > 1:7360204‑M1/1‑28 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:29510088‑M1/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:36739544‑M1/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:40001088‑M1/1‑67 (MQ=255) aCGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTAT > 1:2409691‑M1/1‑67 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaacgt > 1:50415875‑M2/1‑40 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCG > 1:44395143‑M1/1‑68 (MQ=255) gTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCG > 1:22838071‑M1/1‑68 (MQ=255) tGTAAAACCAGAGACGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgtg > 1:7822832‑M1/1‑24 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGC < 1:25268192‑M1/68‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGG < 1:19348372‑M1/67‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGG < 1:46998577‑M1/67‑1 (MQ=255) tGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACCCCTTATCCGGC < 1:22439550‑M1/68‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT > 1:49718787‑M1/1‑67 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:710346‑M1/67‑1 (MQ=255) aaaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCT < 1:46637051‑M1/67‑1 (MQ=255) gcgttcaagcCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTAc < 1:46172410‑M1/58‑1 (MQ=255) aaaCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTAC > 1:17424090‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCgccggatgcgtctctggttttacaacgttaccgggt > 1:34776110‑M2/1‑32 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:38569267‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:18196147‑M1/1‑68 (MQ=255) aCCAGAGACGCATCCGGCATTTGGTTCCAGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAA > 1:49601659‑M1/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:32409956/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:33611471/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:36322189/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:20581663/68‑1 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:37551613/1‑68 (MQ=255) ccAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa < 1:913226/68‑1 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:34214862/1‑67 (MQ=255) cAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACaaa > 1:41212888/1‑67 (MQ=255) aagcCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc > 1:14193616‑M1/5‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:45072922/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:17767151/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:50702950/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAcc < 1:33309070/66‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAAc < 1:48551759/65‑1 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:39421816/1‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:18872479/1‑68 (MQ=255) gaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:32830387/1‑68 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:15120265/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:458393/1‑67 (MQ=255) aCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt < 1:13270621/67‑1 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:371035‑M1/1‑10 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:51329709‑M1/1‑10 (MQ=255) cGCATCCGGCgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctt > 1:6756268‑M1/1‑10 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:42598082‑M1/1‑66 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:16609044‑M1/1‑66 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:12543018‑M1/1‑66 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:2218738‑M1/1‑66 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCAt > 1:45306948‑M1/1‑66 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc < 1:313593‑M1/68‑1 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc < 1:20128807‑M1/68‑1 (MQ=255) CGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATAc < 1:11514153‑M1/68‑1 (MQ=255) GCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACa > 1:27223503‑M1/1‑68 (MQ=255) TCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAAt > 1:39029004‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:8114851‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:21344161‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:6550442‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:41031983‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:258690‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:14797625‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:34491155‑M1/1‑68 (MQ=255) CCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATc > 1:35310479‑M1/1‑68 (MQ=255) GGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAg > 1:13683605‑M1/1‑68 (MQ=255) cgacaggaaccaattgccggatgcgtctgtggttttacaacgttaccgggtgttctttctcgccttt < 1:23135461‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:5572596‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:28389603‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:30308297‑M1/67‑67 (MQ=255) cgacaggaaccaaatgccggatgcgtctctggttttacaacgttaccgggtgttctttctcgccttt < 1:49307366‑M1/67‑67 (MQ=255) | GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTA > CP009273/2229932‑2230065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |