| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 434 (0.700) | 26 (0.050) | 8/94 | NT | 6.6% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 370 (0.710) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 204 total aligned reads displayed.
CGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2436073‑2436000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGG > CP009273/2436103‑2436169 CGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:8122110/1‑68 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGG < 1:17199940/68‑1 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:40915939/1‑67 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:16413686/1‑67 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:12134903/1‑67 GCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG > 1:10055241/1‑67 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTCAACCACGGC < 1:48300357/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:32106156/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:7137427/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC < 1:35585171/67‑1 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC > 1:24198491/1‑67 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC > 1:46518373/1‑67 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGC > 1:43080291/1‑67 GCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTGTGCTGCGGCCCGTGCGGTTAAACCACGGC < 1:22614241/67‑1 TGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCG < 1:585543/68‑1 TGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCG < 1:25742638/68‑1 TGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGC < 1:30007217/67‑1 CAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGC < 1:38400741/67‑1 CAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGC < 1:15890247/67‑1 ATACCCCCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGG < 1:17577937/68‑1 ATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCGCGTGCGGTTAAACCACGGCGCGGCTGG < 1:51053288/68‑1 ATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGG < 1:3659584/68‑1 CCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGCTGGCAG < 1:27742444/68‑1 CACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG < 1:18558935/68‑1 CCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTA < 1:25284091/68‑1 cCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAAC < 1:9256753/67‑1 GCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAAC < 1:40016805/68‑1 GCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAAC < 1:31314815/68‑1 GCCGATAATCGCCGCTTCCCGTGTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAAC < 1:11441082/68‑1 CGATAATGGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:23371680/68‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:21821287/68‑1 CGATAATCGCCGCTTCCCGTTTGCTGCTCCCCTTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:31373491/68‑1 CGATAATCGCCGCTTCCCGCTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:15176529/68‑1 CGATAATCGCCGCATCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:19966317/68‑1 CGATAATCCCCGCTTCCCGTTTGCTGCTGCCCGGGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGC < 1:1453306/68‑1 gcgTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCG < 1:41650335/65‑1 tcCCCGTTTGCTGCAGCCCGTGCGGTTAACCCCCGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGA < 1:50770717/66‑1 TTCCCGTGTGCTGCGGCCCGTGCGGTTAACCCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGA < 1:38220249/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:29392217/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:41079127/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:31035867/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:8491617/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:7389140/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC < 1:36063936/68‑1 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:41887933/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:3728295/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:41459690/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:21033413/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATC > 1:26090604/1‑68 ACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTACGGCAATC > 1:38064864/1‑68 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCAGTGGGTGCTTCCGGCAATCG < 1:1784386/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:12586336/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:51277203/68‑1 CGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG < 1:49431442/68‑1 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGC < 1:28571073/68‑1 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGC < 1:48523766/68‑1 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:45477949/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:25096545/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:37553388/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:45433279/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:18214714/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:38861224/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:20539687/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:39636070/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:46839595/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:2594141/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:14063520/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:12819244/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:2650492/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:11946526/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:28076292/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCG > 1:29590607/1‑67 GGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAG > 1:34846417/1‑38 GGCGCGGCTGGCAGGTAACGCTTTAATGCGCGGATGAGGCCCCCGGACTGGGTGCTTCCGGCAATCG > 1:47379931/1‑67 CGCGGCTGGCAGGTAACGCTTTATTGCGCGTATGAGTCCCCCGCACTGGGTGCTTACGGCAATCGCCA > 1:22078435/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:14953306/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:10157963/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:11169627/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:27558844/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:26386024/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:33223574/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:14756685/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:14902436/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:35752060/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:40564632/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:24006448/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:36800255/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:15206243/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:23233384/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:22933983/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:15673906/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:16908403/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:22745858/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCA > 1:3852037/1‑68 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCC < 1:34385005/67‑1 CGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCC < 1:42840436/67‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:354164/68‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:33360637/68‑1 GGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGG < 1:3943178/67‑1 GGCGGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGG < 1:620920/68‑1 CGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2436073‑2436000‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGG > CP009273/2436103‑2436169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |