| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 434 (0.700) | 26 (0.050) | 8/94 | NT | 6.6% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 370 (0.710) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 802 total aligned reads displayed.
GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435935‑2436067 | tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:3852037‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:20965422‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:14756685‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:41497569‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:4451601‑M1/1‑67 (MQ=255) cTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCG > 1:19068188‑M1/1‑67 (MQ=255) gcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc < 1:48523766‑M1/7‑1 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:25827300‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:45433279‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:2650492‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:11946526‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:39917123‑M1/61‑67 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:22716814‑M1/9‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:46713717‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:51179723‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:45081772‑M1/9‑1 (MQ=255) gggCGCAAACTGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:36904337/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:5861494/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:37744935/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg > 1:9003845/1‑68 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:12797264/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGGGATGCAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:42621372/68‑1 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:37251449/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:39400515/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:3085720/1‑68 (MQ=255) gcgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg < 1:619042/67‑1 (MQ=255) aaCGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTaa > 1:17843771/1‑67 (MQ=255) aaCGGGAAATGCTTTGCGGGGGGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAAc < 1:1670780/68‑1 (MQ=255) gggAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGc < 1:3497375/68‑1 (MQ=255) aaTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg < 1:643375/68‑1 (MQ=255) aaTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg < 1:46933874/68‑1 (MQ=255) aaTGCTTTGCGGGGTGAGGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg < 1:12311541/68‑1 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:28086677/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:27363959/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:9525625/1‑68 (MQ=255) cTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:20426061/1‑67 (MQ=255) tttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagc < 1:15058669/68‑1 (MQ=255) tttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagc < 1:49023939/68‑1 (MQ=255) ttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagca < 1:15342296/68‑1 (MQ=255) ttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagca < 1:31856207/68‑1 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaa > 1:7677303/1‑68 (MQ=255) ggggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTATAACCGCACGGGCAGCAGCaa > 1:30514839/1‑68 (MQ=255) ggTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCaaa < 1:4112439/67‑1 (MQ=255) tccgcgcaataaagcgttacctgccagCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGaa < 1:29663763‑M1/41‑1 (MQ=255) tccgcgcaataaagcgttacctgccagCCGCGCCGTGGGTTAACCGCACGGGCCGCAGCACACGGGaa < 1:38220249‑M1/41‑1 (MQ=255) aaCAGACATTACCGCTCCCGTGCTCCGCGCCGTaatagcgcccgcgccaacaccgcgcgggcaatag > 1:48153426‑M1/1‑33 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAACCGGGAAgcg > 1:18220250/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:29225378/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:25023598/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:26241180/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:1369506/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:33358015/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:10004478/1‑68 (MQ=255) cAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggc > 1:1133245/1‑68 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:5278208/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggc < 1:17544334/64‑1 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:34581203/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:43011006/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:1978833/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:24314389/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:41951574/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:16351342/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAt < 1:26918229/67‑1 (MQ=255) gcgttacctgccagCCGCGCCGTGGTTTAACCGCAAGGGGAGCAGCAAACGGGAAGCGGCGATTATcg < 1:31373491‑M1/54‑1 (MQ=255) aCCGCTCCCCTGCTCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgata > 1:32504799‑M1/1‑23 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:33540404/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:22073514/1‑67 (MQ=255) gatacctgccagCCGCGCCGTGGTTTATCCGCACGGGCACCAGAAAACGGGAAGCGGCGAGTATcggc < 1:25249667‑M1/56‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:22324638/68‑1 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:47518534/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:38945246/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:44171582/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:35634146/1‑68 (MQ=255) gCTCCCCTCCTCCGCGCCGTGGTTTAACCGCACGGGCCGCAGCACACGGGAAGCGGCGATTATcggcg > 1:23762139/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:21594116/68‑1 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:17082749/68‑1 (MQ=255) cctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtg < 1:18558935‑M1/60‑1 (MQ=255) ctgccagCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:27742444‑M1/61‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:14108311/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:23267718/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:7257596/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCAGCggtgg < 1:15946315/68‑1 (MQ=255) ccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt < 1:3659584‑M1/64‑1 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:29006945/1‑68 (MQ=255) tCCGCGCCGTGGTTTACCCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTAACGGCGGTGGTATTg > 1:671437/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:8277408/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:32969232/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:50342310/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:46377180/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:45848525/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:43315416/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:41005541/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:4021504/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:35992284/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:33927751/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:28475822/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:23054790/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:10923186/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:10385622/1‑67 (MQ=255) gCCGCCCCGTGGTTTAACCGCACGGGCAGCAGCAAACGCGAACCGGCGATTATCCGCGGTGGTATTg < 1:49535808‑M1/66‑1 (MQ=255) | GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435935‑2436067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |