| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3256491 = | 768 (1.240) | 33 (0.070) | 13/90 | NT | 5.2% | coding (529/1209 nt) | tdcD | propionate kinase/acetate kinase C, anaerobic |
| ? | CP009273 | 3256545 = | 598 (1.200) | coding (475/1209 nt) | tdcD | propionate kinase/acetate kinase C, anaerobic | |||||
Only 100 of 1067 total aligned reads displayed.
AGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAA > CP009273/3256424‑3256558 | actcaggtggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggcct > 1:29709806‑M1/68‑68 (MQ=255) tcaggtggcgttatttgatacctgtttcccccagacgatggctccggaagcttatttattcggccTGc > 1:31138468‑M1/66‑68 (MQ=255) tcaggtggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGc > 1:32372219‑M1/66‑68 (MQ=255) gCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTg > 1:1311835/1‑67 (MQ=255) ccGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGt < 1:31728895/65‑1 (MQ=255) ccGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGcc > 1:9092450/1‑68 (MQ=255) ccGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGcc > 1:24437186/1‑68 (MQ=255) caggtggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGcc > 1:18941859‑M1/65‑68 (MQ=255) caggtggcggtatttgataccagttaccaccagccgagggctcctgaagcttatttatacggccTGcc > 1:4528617‑M1/65‑68 (MQ=255) cGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGcc < 1:31450147/67‑1 (MQ=255) cGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCg > 1:36472210/1‑68 (MQ=255) ggtggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGt < 1:13780359‑M1/6‑1 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGt > 1:48962328‑M1/61‑66 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGt > 1:46215169‑M1/61‑66 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTgg < 1:41257785‑M1/8‑1 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTg > 1:49217242‑M1/61‑67 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTg > 1:32084782‑M1/61‑67 (MQ=255) tggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTg > 1:39261147‑M1/61‑67 (MQ=255) tggcggtatttgataccaggttccaccagacgatggctccggaagcttatttatacggccTGCCGTg > 1:45711646‑M1/61‑67 (MQ=255) aGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTgg > 1:21406692/1‑68 (MQ=255) ggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTGGa > 1:48135843‑M1/60‑68 (MQ=255) ggcggtatttgataccagtttccaccagacgatggctccggaagcttatttatacggccTGCCGTGGa > 1:20440729‑M1/60‑68 (MQ=255) cATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGaaa < 1:20999586/68‑1 (MQ=255) tCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAAcc < 1:8130415/68‑1 (MQ=255) tCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAAcc < 1:24065432/68‑1 (MQ=255) tCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAAcc < 1:50245553/68‑1 (MQ=255) tCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATa > 1:37304661/1‑68 (MQ=255) tCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATa < 1:44759556/68‑1 (MQ=255) tCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATa > 1:51299057/1‑68 (MQ=255) cAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGc < 1:43197410/68‑1 (MQ=255) cAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGc < 1:12820965/68‑1 (MQ=255) cAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGc < 1:17584414/68‑1 (MQ=255) cAGAATCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACgg < 1:40005354/67‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGt < 1:50500940/66‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTac < 1:18578730/68‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTac < 1:33895116/68‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTac < 1:37480409/68‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTac < 1:34207292/68‑1 (MQ=255) ttCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTac < 1:9645563/68‑1 (MQ=255) caggagCGAATGTGCGCGGTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:7340319/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:22798445/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:40705744/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:27982329/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:27233501/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:25971743/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:24790939/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:17214510/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:14830425/68‑1 (MQ=255) cagcagCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTacac < 1:1184389/68‑1 (MQ=255) agcGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTa > 1:40199141/1‑67 (MQ=255) agcGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTa > 1:20123250/1‑67 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTTGAAACCATAACGGCGTACACCTAActct < 1:22253943/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct > 1:33069863/1‑67 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:4674627/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:35580664/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:1453641/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:15865667/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct > 1:16593200/1‑67 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:19723165/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAActct < 1:25685300/67‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCtt < 1:1565384/68‑1 (MQ=255) aTGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACACtt > 1:34671418/1‑68 (MQ=255) tgtgCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTc < 1:41670679/68‑1 (MQ=255) tgtgCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTc < 1:28399262/68‑1 (MQ=255) tgCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCat > 1:21878865/1‑68 (MQ=255) tgCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCat > 1:29959691/1‑68 (MQ=255) gcgcgcTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCata < 1:10598385/68‑1 (MQ=255) cgcgcTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCataa > 1:11691572/1‑68 (MQ=255) gctccggaagcttatttatacggccTGCCGTGGAACCCATAACGGCGTACACCGTACTCGTgataatt < 1:30479387‑M1/43‑2 (MQ=255) gcTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAatat > 1:42403540/1‑68 (MQ=255) gcTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAatat > 1:37738898/1‑68 (MQ=255) tGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATAttt < 1:12338395/68‑1 (MQ=255) tGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATAttt < 1:43605523/68‑1 (MQ=255) tGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATAttt < 1:7087270/68‑1 (MQ=255) tGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATAttt < 1:15411366/68‑1 (MQ=255) aCATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACg > 1:38274608/1‑67 (MQ=255) aCATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTACACg > 1:35244537/1‑67 (MQ=255) cGGTGCGACGTGCCGTGGAAACAATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGcc > 1:50878128/1‑68 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGcc < 1:7649264/67‑1 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCg > 1:28631125/1‑68 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCg > 1:11208951/1‑68 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCg > 1:6354298/1‑68 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCg > 1:38613635/1‑68 (MQ=255) ggTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCg > 1:23289204/1‑68 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:18214411/67‑1 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:28982063/67‑1 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:29423252/67‑1 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:25113080/67‑1 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:46943561/67‑1 (MQ=255) tGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGt < 1:47520555/67‑1 (MQ=255) gCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGtat < 1:3351110/68‑1 (MQ=255) gCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGtat > 1:36851412/1‑68 (MQ=255) acggccTGCCGTGGAAACCATAACGGCGTACGCCTAACTCTTCATAATTTTTCCGCGGCAGGCCGtat < 1:5503377‑M1/62‑1 (MQ=255) acggccTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGtat < 1:42989945‑M1/62‑1 (MQ=255) gACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGtata < 1:44133827/67‑1 (MQ=255) gACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGtata < 1:10014683/67‑1 (MQ=255) gACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTataa < 1:26511079/68‑1 (MQ=255) gACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTataa > 1:8423704/1‑68 (MQ=255) gACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTataa > 1:48529433/1‑68 (MQ=255) TGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTataaataa < 1:36175691‑M1/68‑1 (MQ=255) | AGGCCGGAGTCATCTTCCGCCAGATTCAGCAGCGAATGTGCGCGCTGGGAAACATAGCGGTGCGACGTGCCGTGGAAACCATAACGGCGTACACCTAACTCTTCATAATATTTCCACGGCAGGCCGTATAAATAA > CP009273/3256424‑3256558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |