| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3334084 | 524 (0.850) | 24 (0.050) | 12/94 | NT | 5.3% | coding (451/978 nt) | yrbG | putative calcium/sodium:proton antiporter |
| ? | CP009273 | = 3334100 | 422 (0.810) | coding (467/978 nt) | yrbG | putative calcium/sodium:proton antiporter | |||||
Only 100 of 916 total aligned reads displayed.
GGTATCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCC > CP009273/3334018‑3334151 | tATCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAAc > 1:46490578/1‑68 (MQ=255) aTCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACg < 1:41681637/68‑1 (MQ=255) aTCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACg > 1:43293557/1‑68 (MQ=255) cTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTc < 1:35244578/68‑1 (MQ=255) cTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTc > 1:35656631/1‑68 (MQ=255) ttCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAg > 1:4275220/1‑68 (MQ=255) tctcCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgg > 1:21397518/1‑68 (MQ=255) tctcCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgg > 1:20826094/1‑68 (MQ=255) tctcCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgg > 1:22026076/1‑68 (MQ=255) ctcctcTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAggg < 1:12949896/68‑1 (MQ=255) tcctcTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgggg > 1:48685141/1‑68 (MQ=255) cctcTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgggg > 1:32546122/1‑67 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgggg > 1:37746947/1‑65 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgggg > 1:32944573/1‑65 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAgggg > 1:5735442/1‑65 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACt < 1:39605184/68‑1 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACt < 1:24918759/68‑1 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACt < 1:19424363/68‑1 (MQ=255) tctTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACt < 1:40650986/68‑1 (MQ=255) tctTTCTGGCGGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACt < 1:7914882/68‑1 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:15924101‑M2/1‑65 (MQ=255) ggCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcc > 1:24229595‑M2/1‑63 (MQ=255) ggCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcc > 1:44862251‑M2/1‑63 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:17486236‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:23008162‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:1619022‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:10931380‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:49673182‑M2/65‑4 (MQ=255) tgtgCTATGTCTGCTGTTCATTGTTAAACTTGCACTTCTGGCTGAACGTCAGGGGACTGAcagcctga > 1:17069047‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:23197367‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:7219956‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:26783337‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctg > 1:46288202‑M2/1‑60 (MQ=255) ggtgcTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:42169023‑M2/2‑60 (MQ=255) gtgCTATGGCGGCTGTGAATTGTT‑AACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGAcc < 1:13655157/68‑1 (MQ=255) gCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGAcc < 1:6440406/67‑1 (MQ=255) cTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCag > 1:28840220/1‑68 (MQ=255) tATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCaga < 1:30222522/68‑1 (MQ=255) aTGGCTGCTGTTCATTGTTAAACTTGCTCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagag < 1:29824789/68‑1 (MQ=255) tGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga < 1:9382872/68‑1 (MQ=255) tGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga < 1:45772934/68‑1 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCCCGTCAGGCTGAACGTCAGGGGACTGCCAGCCTGACCagagc > 1:25279940/1‑66 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:24466542/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:40000741/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:46931058/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:6939119/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:43584201/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:20136290/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:26409917/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:50751894/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:31331889/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:30833324/1‑67 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtt > 1:2714682‑M1/1‑34 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGACCGTCAGGGGACTGACAGCCTGACCAGAGagc < 1:25911234/67‑1 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctgacgtgcaagt > 1:37064462‑M2/1‑50 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagca > 1:15244538/1‑68 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGGCAGGCTGAACGGCAGGGGACTGAcagcctgacgtgcaagt > 1:44105221‑M2/1‑50 (MQ=255) tgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcag < 1:45983915/68‑1 (MQ=255) tgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcag < 1:47150021/68‑1 (MQ=255) gctgTTCATTGTTAAACTTGCACGTCAGTCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcagc < 1:31715771/68‑1 (MQ=255) gctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcagc < 1:51261579/68‑1 (MQ=255) gctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcagc < 1:41402625/68‑1 (MQ=255) tgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt < 1:5522713/68‑1 (MQ=255) tgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt < 1:11651160/68‑1 (MQ=255) gTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt > 1:17954083/1‑67 (MQ=255) tCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctgacgtgcaagtttaacaat > 1:10669066‑M2/1‑43 (MQ=255) tCATTGTCAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCa > 1:8825047/1‑68 (MQ=255) aTTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCaga > 1:3603155/1‑68 (MQ=255) tGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGc < 1:29251736/68‑1 (MQ=255) tGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGc < 1:22614224/68‑1 (MQ=255) gTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCaga > 1:28302422/1‑65 (MQ=255) gTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCaga > 1:23972905/1‑65 (MQ=255) tAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTg > 1:49451911/1‑67 (MQ=255) tAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGc < 1:48199191/68‑1 (MQ=255) tAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGc < 1:9637002/68‑1 (MQ=255) tAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGc < 1:37274518/68‑1 (MQ=255) aaaCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGcc < 1:5293403/68‑1 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:39014247/1‑68 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:34936270/1‑68 (MQ=255) ttGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGt > 1:36473033/1‑68 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAcg > 1:444961/1‑68 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAc < 1:40941440/67‑1 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAc < 1:1405974/67‑1 (MQ=255) gTCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcac > 1:16644655‑M1/1‑9 (MQ=255) tCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca > 1:4119980‑M1/1‑8 (MQ=255) tCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca > 1:45412536‑M1/1‑8 (MQ=255) tCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca > 1:18470369‑M1/1‑8 (MQ=255) tCAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca > 1:21153527‑M1/1‑8 (MQ=255) cAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca > 1:40334404‑M1/1‑7 (MQ=255) cAGGCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcaca < 1:34227634‑M1/67‑61 (MQ=255) aGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGa > 1:10012092/1‑68 (MQ=255) ggCTGtcagtcccctgacgttcagcctgacgtgcaagtttaccaatgaacagcagccatagcacagcc > 1:15560670‑M1/1‑5 (MQ=255) ggCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagcc > 1:27507705‑M1/1‑5 (MQ=255) ggCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagcc > 1:33421315‑M1/1‑5 (MQ=255) ggCTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagcc > 1:12587321‑M1/1‑5 (MQ=255) cTGtcagtcccctgacgttcagccttacgtgcaagtttaacaatgaacagcagccatagcacagc < 1:38566561‑M1/65‑63 (MQ=255) cTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagccag > 1:27669037‑M1/1‑3 (MQ=255) cTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagccag > 1:7541891‑M1/1‑3 (MQ=255) cTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagccag > 1:14592560‑M1/1‑3 (MQ=255) cTGtcagtcccctgacgttcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagc < 1:50328063‑M1/65‑63 (MQ=255) | GGTATCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCC > CP009273/3334018‑3334151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |