| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3334084 | 524 (0.850) | 24 (0.050) | 12/94 | NT | 5.3% | coding (451/978 nt) | yrbG | putative calcium/sodium:proton antiporter |
| ? | CP009273 | = 3334100 | 422 (0.810) | coding (467/978 nt) | yrbG | putative calcium/sodium:proton antiporter | |||||
Only 100 of 679 total aligned reads displayed.
TTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGTTTTTATG > CP009273/3334034‑3334166 | cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:23905710‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:26943361‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:15924101‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:30413733‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:13310047‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:49461394‑M2/1‑65 (MQ=255) cTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAca < 1:3450770‑M2/67‑3 (MQ=255) cTGGCGGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag > 1:37179302‑M2/1‑65 (MQ=255) ggCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGAGTGAcagcc > 1:31434631‑M2/1‑63 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:45819177‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:43949596‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:25819218‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:7815344‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:46292383‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:40677895‑M2/65‑4 (MQ=255) gCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcag < 1:3638851‑M2/65‑4 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:21153527‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:26189915‑M2/1‑60 (MQ=255) tgtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctg > 1:27604162‑M2/1‑60 (MQ=255) ggtgcTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctga > 1:42169023‑M2/2‑60 (MQ=255) gtgCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctgac > 1:16644655‑M2/1‑59 (MQ=255) gCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGAcc < 1:29272676/67‑1 (MQ=255) gCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGAcc < 1:29998304/67‑1 (MQ=255) gCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGAcc < 1:2082848/67‑1 (MQ=255) gCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCa > 1:3542878/1‑68 (MQ=255) cTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCag > 1:34981511/1‑68 (MQ=255) tATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCaga > 1:20014486/1‑68 (MQ=255) tATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCag < 1:43539665/67‑1 (MQ=255) aTGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagag < 1:17524793/68‑1 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagagc > 1:26531232/1‑66 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:24466542/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:9541480/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:6268675/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:35788622/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:32713650/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:5358352/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:13849812/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:46676364/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:28913696/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:28033067/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:19605254/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:22134103/1‑67 (MQ=255) ggCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCagaga > 1:23053598/1‑67 (MQ=255) gctgctGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagc > 1:15041499/1‑68 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagca > 1:41364682/1‑68 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagca > 1:44988450/1‑68 (MQ=255) ctgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGCGACTGACAGCCTGACCAGAGagca > 1:22784663/1‑68 (MQ=255) tgctgTTCATTGTTAAACTTGCACTTCAGGCTGAACGTCAGGGGACTGACTGCCTGACCAGAGagcag < 1:16264929/68‑1 (MQ=255) tgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcag < 1:47150021/68‑1 (MQ=255) tgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcag < 1:9713357/68‑1 (MQ=255) tgctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGagcag < 1:11961859/68‑1 (MQ=255) ctgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCt > 1:33753042/1‑68 (MQ=255) tgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt < 1:50257580/68‑1 (MQ=255) tgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt < 1:5522713/68‑1 (MQ=255) tgTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCtt < 1:12715542/68‑1 (MQ=255) tCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctgacgtgcaagtttaacaat > 1:10669066‑M2/1‑43 (MQ=255) tCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCa < 1:39235169/68‑1 (MQ=255) aTTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCaga < 1:46107654/68‑1 (MQ=255) tGTTAAACTTGCACGTCAGGCTGACCGTCAGGGGACTGAcagcctgacgtgcaagtttaacaattaac > 1:51245877‑M2/1‑39 (MQ=255) tGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGc < 1:6514381/68‑1 (MQ=255) gTTAAACTTGCACGTCAGGCTGACCGTCAGGGGACTGAcagcctgacgtgcaagtttaacaatgaaca > 1:41863389‑M2/1‑38 (MQ=255) gTTAAACTTGCACGTCAGGCTGAACGTCTGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCaga > 1:39966853/1‑65 (MQ=255) tAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGc < 1:48199191/68‑1 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:40219285/1‑68 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:24228066/1‑68 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:41505146/1‑68 (MQ=255) aCTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCcgc > 1:3207207/1‑68 (MQ=255) cTTGCACGTCAGGCTGAACGTCAGGGGACTGAcagcctgacgtgcaagtttaacaatgaacagcagcc > 1:50518876‑M2/1‑32 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAcg > 1:38863129/1‑68 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAcg > 1:444961/1‑68 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAc < 1:37377490/67‑1 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAc < 1:31140335/67‑1 (MQ=255) aCGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAc < 1:2143205/67‑1 (MQ=255) cGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGAcgg < 1:33079474/68‑1 (MQ=255) aGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGa > 1:10012092/1‑68 (MQ=255) cTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGAtt > 1:6807731/1‑67 (MQ=255) cTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGAtt > 1:5700687/1‑67 (MQ=255) cTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGAtt > 1:27222498/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGCGCAGCTTGCAGAGCTGCCGCGTGACGTAGGATAGCCCg > 1:11299932/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCg > 1:18707685/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCg > 1:28360287/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCg > 1:42879736/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCg > 1:48659975/1‑67 (MQ=255) cGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCg > 1:8657772/1‑67 (MQ=255) tCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTc > 1:5190323/1‑67 (MQ=255) tCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTc > 1:8953464/1‑67 (MQ=255) tCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTc > 1:38661463/1‑67 (MQ=255) aGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTcgcg > 1:25275151/1‑68 (MQ=255) aGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTcgcg > 1:40994125/1‑68 (MQ=255) ggACTGAcagcctgacgtgcaagtttaacaatgaacagcagccatagcacagccagaaagaggaga > 1:7420014‑M2/1‑7 (MQ=255) ggACTGACAGCCTGCCCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttt > 1:37976462/1‑68 (MQ=255) ggACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTcgcg < 1:36734273/65‑1 (MQ=255) ggACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTcgcg < 1:3947577/65‑1 (MQ=255) ggACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttt > 1:1551767/1‑68 (MQ=255) ggACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttt > 1:17967344/1‑68 (MQ=255) ggACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGtt < 1:249608/67‑1 (MQ=255) aCTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttttt > 1:7061175/1‑68 (MQ=255) aCTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttttt > 1:14556017/1‑68 (MQ=255) aCTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGttttt > 1:17217207/1‑68 (MQ=255) gACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGTTTTTATg > 1:45402207/1‑68 (MQ=255) | TTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGTTTTTATG > CP009273/3334034‑3334166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |