New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3509341 =924 (1.490)49 (0.090) 8/94 NT 7.1% intergenic (‑69/+38) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring
?CP009273 3509369 = 505 (0.970)intergenic (‑97/+10) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring

Only 100 of 1114 total aligned reads displayed.

CTGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCA  >  CP009273/3509274‑3509407
                                                                   |                                                                  
caggccaaaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatc                                                                    >  1:40869423‑M1/68‑68 (MQ=255)
 tGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACt                                                                   <  1:10802167/68‑1 (MQ=255)
    ccaaaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTccc                                                                <  1:46226915‑M1/5‑1 (MQ=255)
     taactaaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCg                                                               <  1:42685656/68‑1 (MQ=255)
     caaaaacccgtgggcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTccc                                                                >  1:39321838‑M1/63‑67 (MQ=255)
       actaaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCa                                                             >  1:5745153/1‑68 (MQ=255)
       aaaacccgtgtgcgaaaccgctgcgtcaggtacaggccgatctgaagtaatcaaggttatCTCCCGCa                                                             >  1:38345415‑M1/61‑68 (MQ=255)
         taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           <  1:6542092/68‑1 (MQ=255)
         taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           >  1:16842889/1‑68 (MQ=255)
         taaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAAc                                                           <  1:14044612/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:23646588/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:27220404/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:31041793/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:31576805/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:35943619/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:26853716/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:43568007/68‑1 (MQ=255)
          aaTTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACg                                                          <  1:32924484/68‑1 (MQ=255)
            ttACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGAt                                                        <  1:6304569/68‑1 (MQ=255)
              acacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:21286060/1‑68 (MQ=255)
              acacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:45533752/1‑68 (MQ=255)
              acacCTTCTCCGGCTGAGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      <  1:13514856/68‑1 (MQ=255)
               cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:34435267/1‑67 (MQ=255)
               cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:44356380/1‑67 (MQ=255)
               cacCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaa                                                      >  1:44944583/1‑67 (MQ=255)
                acCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATaaa                                                     >  1:45207646/1‑67 (MQ=255)
                 ccTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAccc                                                   >  1:49432720/1‑68 (MQ=255)
                 ccTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAAcc                                                   >  1:36934729/1‑68 (MQ=255)
                 ccTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAAcc                                                   <  1:14925869/68‑1 (MQ=255)
                 ccTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAAcc                                                   >  1:11455845/1‑68 (MQ=255)
                  cTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCa                                                  <  1:1532370/68‑1 (MQ=255)
                  cTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCa                                                  <  1:24221808/68‑1 (MQ=255)
                    tctcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCAtt                                                <  1:32550511/68‑1 (MQ=255)
                      tcCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGc                                              >  1:12483623/1‑68 (MQ=255)
                        cGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCgg                                            >  1:41731386/1‑68 (MQ=255)
                         ggCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCggg                                           <  1:24786370/68‑1 (MQ=255)
                          gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCgggt                                          >  1:51166485/1‑67 (MQ=255)
                          gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:23163179/1‑68 (MQ=255)
                          gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:12056717/1‑68 (MQ=255)
                          gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:36557334/1‑68 (MQ=255)
                          gCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGga                                          >  1:18860418/1‑68 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgaga                                        >  1:38726802/1‑68 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgaga                                        >  1:49975944/1‑68 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:22883904/67‑1 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:2979677/67‑1 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:30235423/67‑1 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:15658511/67‑1 (MQ=255)
                            tgtgGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGgag                                         <  1:15973312/67‑1 (MQ=255)
                               ggAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATaa                                     <  1:20861903/68‑1 (MQ=255)
                               ggAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATaa                                     <  1:49048168/68‑1 (MQ=255)
                                 agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:5067043/67‑1 (MQ=255)
                                 agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                    <  1:10022210/67‑1 (MQ=255)
                                    aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                >  1:48053809/1‑68 (MQ=255)
                                     aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                               <  1:40268461/68‑1 (MQ=255)
                                     aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACCATAAACCATTGCGGGAGATAACCTTGa                               <  1:47389918/68‑1 (MQ=255)
                                      gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                              >  1:1736988/1‑68 (MQ=255)
                                      gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                              >  1:46793303/1‑68 (MQ=255)
                                         ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:9239516/68‑1 (MQ=255)
                                         ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:5291761/68‑1 (MQ=255)
                                         ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                           <  1:43870056/68‑1 (MQ=255)
                                          gccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:43087796‑M1/43‑1 (MQ=255)
                                          gccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:28728835‑M1/43‑1 (MQ=255)
                                          cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:35183807/68‑1 (MQ=255)
                                          cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:22111888/68‑1 (MQ=255)
                                          cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                          <  1:39870831/68‑1 (MQ=255)
                                            aCAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATACACCATTGCGGGAGATCACCTTGATTACTTc                        >  1:22443322/1‑68 (MQ=255)
                                              aGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                      >  1:10265010/1‑68 (MQ=255)
                                              aGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                      >  1:20175185/1‑68 (MQ=255)
                                                 aTCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                      <  1:17809762/65‑1 (MQ=255)
                                                   ccAGCGCTTCATGCAACTGCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:41270913/68‑1 (MQ=255)
                                                   ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:37574295/68‑1 (MQ=255)
                                                   ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCg                  >  1:28078279/1‑67 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:33973842/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:31954685/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:7024847/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:34922346/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:21861199/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:20553214/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:35588220/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:19755598/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:8844295/68‑1 (MQ=255)
                                                    cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:14431691/68‑1 (MQ=255)
                                                    agtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:30752730‑M1/52‑1 (MQ=255)
                                                     gtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGCTAACCTTGATTACTTCAGTTCGgcg               <  1:27728253‑M1/54‑2 (MQ=255)
                                                     gtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                 <  1:25493590‑M1/52‑1 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCTGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:12849147/68‑1 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:9592259/68‑1 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            >  1:8297865/1‑68 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            >  1:48671203/1‑68 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:42186289/68‑1 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:19285387/68‑1 (MQ=255)
                                                        gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:18250271/68‑1 (MQ=255)
                                                         tcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt            <  1:7462157‑M1/57‑1 (MQ=255)
                                                          ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                <  1:37866657/62‑1 (MQ=255)
                                                          ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           <  1:48500924/67‑1 (MQ=255)
                                                          ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           <  1:26055180/67‑1 (MQ=255)
                                                          ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTAc          <  1:3355608/68‑1 (MQ=255)
                                                           tCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTa           >  1:16684038/1‑66 (MQ=255)
                                                                cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc     >  1:292972/1‑67 (MQ=255)
                                                                cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc     >  1:7728552/1‑67 (MQ=255)
                                                                   |                                                                  
CTGACTAACTAATTACACCTTCTCCGGCTGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCA  >  CP009273/3509274‑3509407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.