New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3509341 =924 (1.490)49 (0.090) 8/94 NT 7.1% intergenic (‑69/+38) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring
?CP009273 3509369 = 505 (0.970)intergenic (‑97/+10) dam/damX DNA adenine methyltransferase/cell division protein that binds to the septal ring

Only 100 of 846 total aligned reads displayed.

TGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGG  >  CP009273/3509302‑3509436
                                                                   |                                                                   
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATaa                                                                  >  1:43551949/1‑66 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:10022210/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:14330634/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:30885338/67‑1 (MQ=255)
     agaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAc                                                                 <  1:32099878/67‑1 (MQ=255)
      gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAcc                                                                <  1:47246394/67‑1 (MQ=255)
      gaAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAAcc                                                                <  1:37690200/67‑1 (MQ=255)
        aaGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                                             >  1:28551574/1‑68 (MQ=255)
        aaGCTCCGACAACATCCCGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTg                                                             >  1:25415399/1‑68 (MQ=255)
         aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                                                            <  1:5944475/68‑1 (MQ=255)
         aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                                                            <  1:5209646/68‑1 (MQ=255)
         aGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGa                                                            <  1:3061024/68‑1 (MQ=255)
          gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           >  1:37166979/1‑68 (MQ=255)
          gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           >  1:17369428/1‑68 (MQ=255)
          gCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           >  1:34674899/1‑68 (MQ=255)
          acaggccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGa                                                            <  1:20788928‑M2/10‑1 (MQ=255)
          acaggccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGAt                                                           <  1:32995953‑M1/39‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:35465513/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:10406184/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:42745755/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:45260289/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:27319602/68‑1 (MQ=255)
             ccGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTAc                                                        <  1:9239516/68‑1 (MQ=255)
              gccgatctgaagtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:43087796‑M1/43‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:39004407/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:22111888/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:12986328/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:4422524/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:42356948/68‑1 (MQ=255)
              cGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACt                                                       <  1:18033554/68‑1 (MQ=255)
               ccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTAc                                                        <  1:26222670‑M2/14‑1 (MQ=255)
                  aGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                                                   >  1:9773548/1‑68 (MQ=255)
                  aGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                                                   >  1:20175185/1‑68 (MQ=255)
                     aTCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                                                   <  1:7726752/65‑1 (MQ=255)
                     aTCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                                                   <  1:47869633/65‑1 (MQ=255)
                     aTCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAg                                                   <  1:48149126/65‑1 (MQ=255)
                     aTCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGa                                                  <  1:18453069/66‑1 (MQ=255)
                       ccAGCGCTTCATGCAACTGCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:41270913/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:33616717/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:2686887/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:48544472/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:49926762/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:7982371/68‑1 (MQ=255)
                       ccAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCg                                               >  1:14826433/1‑67 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:15775743/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:13811583/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:40091136/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:40338326/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:46034660/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:17763501/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:31611034/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:46216952/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:4921157/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:19755598/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:24360738/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:50853603/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:5459705/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGc                                             <  1:21861199/68‑1 (MQ=255)
                        cAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGAAAACCTTGATTACTTCAGATCGGc                                             <  1:15159238/68‑1 (MQ=255)
                        agtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTACTTCAGATCgg                                              <  1:30075332‑M2/24‑1 (MQ=255)
                        agtaatcaaggttatctcccgcaatggtttatcgttgcgggagATAACCTTGATTACTTCAGATCgg                                              <  1:46489700‑M2/24‑1 (MQ=255)
                        agtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:22416855‑M1/52‑1 (MQ=255)
                         gtaatcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              <  1:41847612‑M1/52‑1 (MQ=255)
                          gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCgg                                              >  1:21248710/1‑65 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:44884363/1‑68 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:27905908/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:48774433/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:12223728/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:12747892/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:29630389/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:32649895/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:16705585/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:35945997/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:40942188/68‑1 (MQ=255)
                            gcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         >  1:8786985/1‑68 (MQ=255)
                             tcaaggttatCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGt                                         <  1:7462157‑M1/57‑1 (MQ=255)
                              ttCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTAc                                       <  1:3502171/68‑1 (MQ=255)
                                   gCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:16352173/1‑68 (MQ=255)
                                    cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:43788145/1‑67 (MQ=255)
                                    cAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAc                                  >  1:34118072/1‑67 (MQ=255)
                                      aCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCa                               >  1:3116581/1‑68 (MQ=255)
                                          CCGCAACTATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCgg                           >  1:11653104‑M1/1‑68 (MQ=255)
                                          CCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCgg                           >  1:6984122‑M1/1‑68 (MQ=255)
                                            GCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGtt                         <  1:18759055‑M1/68‑1 (MQ=255)
                                             CAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGtt                         <  1:38441757‑M1/67‑1 (MQ=255)
                                             CAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGtt                         <  1:50438727‑M1/67‑1 (MQ=255)
                                              AACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTc                       <  1:29251856‑M1/68‑1 (MQ=255)
                                              AACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTc                       <  1:23324624‑M1/68‑1 (MQ=255)
                                                cGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGc                     <  1:36810331/68‑1 (MQ=255)
                                                    aaaCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCAc                 >  1:39649178/1‑68 (MQ=255)
                                                      aCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACgg               >  1:15558992/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:22662871/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:10938541/1‑68 (MQ=255)
                                                       ccATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACggg              >  1:20550525/1‑68 (MQ=255)
                                                        cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGt             >  1:25712078/1‑68 (MQ=255)
                                                        cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGt             >  1:23852082/1‑68 (MQ=255)
                                                        cATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGt             >  1:6559491/1‑68 (MQ=255)
                                                              gggagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTgg       <  1:28079095‑M2/63‑1 (MQ=255)
                                                              gggagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTgg       <  1:38079109‑M2/63‑1 (MQ=255)
                                                              gggagATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTg        >  1:23029289‑M2/6‑67 (MQ=255)
                                                                   |                                                                   
TGTGGAGAAAGCTCCGACAGCATCCAGCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGG  >  CP009273/3509302‑3509436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.