| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4034176 | NA (NA) | 36 (0.070) | 12/92 | NT | 7.2% | intergenic (+180/+90) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | CP009273 | = 4034200 | 563 (0.910) | intergenic (+204/+66) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
Only 100 of 1086 total aligned reads displayed.
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGC > CP009273/4034124‑4034241 | gAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCTGAAGGCCATCCTGACG < 1:49837773‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:9718375‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:5121869‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:50442883‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:45750607‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:42929813‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:38412151‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:27153496‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:24245337‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:42567919‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:24879330‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACG > 1:19496224‑M2/1‑67 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCAACCTGACG < 1:21106858‑M2/67‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCGCCATAAACTGCC‑GGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:33171727‑M2/68‑1 (MQ=255) aGGGTGGCGGGCAGGACGCCCACCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG < 1:6642823‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGA < 1:22861350‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:4747797‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:48689648‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:23643589‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:49586410‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:48206861‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:4786263‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:11221496‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:27434435‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:30370497‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:8632985‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:18577259‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:13550179‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA < 1:37011133‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCGGACGGA < 1:6002332‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCAGACGGA < 1:17804148‑M2/68‑1 (MQ=255) gggTGGCGGGCAGGACGCCCGCCAAAAACTGCCCGGCATCAAATAAAGCAGAAGGCCATCCTGACGGA < 1:56360‑M2/68‑1 (MQ=255) ggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT < 1:25182821‑M2/68‑1 (MQ=255) ggTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAT < 1:3947880‑M2/68‑1 (MQ=255) ggTGGCGGGCAGGACGCCCGCCAAAAACAGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGAT < 1:39849494‑M2/68‑1 (MQ=255) gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG < 1:41003409‑M2/68‑1 (MQ=255) gTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGA > 1:1227734‑M2/1‑66 (MQ=255) tGGCGGGCAGGACGCCCGCCATAAACTGCCCGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG < 1:9147792‑M2/67‑1 (MQ=255) tGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG > 1:49173798‑M2/1‑67 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:34983362‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:15403706‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:31504776‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:30628508‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:17024992‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:30034020‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:29725453‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:44434016‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:46129077‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:27979337‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:16548906‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGC > 1:11878342‑M2/1‑68 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:10502396‑M2/67‑1 (MQ=255) ggCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:19029240‑M2/67‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:31096670‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:50770337‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:35386551‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:2932016‑M2/66‑1 (MQ=255) gCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGG < 1:22423945‑M2/66‑1 (MQ=255) ctggcaGGACGCCCGCCAAAAACTGCCAGGCATCAAAATAAGCAGAAGGCCATCCTGACGGATGGCC > 1:14540079‑M2/3‑67 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC > 1:39013793‑M2/1‑67 (MQ=255) cGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC > 1:19990856‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTT > 1:46681626‑M2/1‑68 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:37430860‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:35956350‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:6413036‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:42112958‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:14040501‑M2/1‑67 (MQ=255) gggCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT > 1:3406632‑M2/1‑67 (MQ=255) cAGGACGCCCTCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTct > 1:43521647‑M2/1‑65 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgc > 1:36543528‑M2/1‑61 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCa < 1:26627672/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCAt > 1:33517172/1‑68 (MQ=33) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCAtt > 1:28722569/1‑68 (MQ=35) cgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGgc > 1:17526290/1‑67 (MQ=40) aTAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgc > 1:45080835‑M2/1‑52 (MQ=255) aTAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACAGATGGCCTTTTTGCATTGGCGCAGa < 1:25930969/68‑1 (MQ=255) aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa > 1:41698619/1‑68 (MQ=255) aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa > 1:21350466/1‑68 (MQ=255) aCTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaa > 1:28340827/1‑68 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa > 1:8111407/1‑68 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa > 1:16031051/1‑68 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa > 1:34548835/1‑68 (MQ=255) cTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaa > 1:32363544/1‑68 (MQ=255) gCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAAt > 1:13006252/1‑68 (MQ=255) gCCACGCATCAAATTACGCAGAAGGCCAACCTGACGGATGGCCTTctgcttaatttgatgcctggcag > 1:37878608‑M2/1‑45 (MQ=255) cccaGGCATCAAATTACGCAGACGGCCATCCTGACGGATGGCCTTctgcttaattttatgcctggcag > 1:32738623‑M2/2‑45 (MQ=255) ccggcaGCAAATTAACCAGAAGGCCAACCTGACGGATGGCCTTctgcttaatttgatgcctggcagtt > 1:21893159‑M2/3‑43 (MQ=255) cAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTctgcttaatttgatgcctggcagt > 1:2322545‑M2/1‑43 (MQ=255) gCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCgg > 1:7708408/1‑68 (MQ=255) aTCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGAt > 1:40385863/1‑68 (MQ=255) aaaTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCg < 1:47098284/68‑1 (MQ=255) aTTAAGCAGTAGGCCATCCTGAGGGATGGCCTTTTTGCATTGGCGCAGAAAAACATGCCGGATGCGAc < 1:18185997/68‑1 (MQ=17) aTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGAc < 1:45413135/68‑1 (MQ=255) aTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGAc > 1:7066174/1‑68 (MQ=255) aTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCCCAGAAAAAAATGCCGGATGCgc > 1:20332702/1‑66 (MQ=255) ttAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGAc > 1:14937122/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:20559436/1‑67 (MQ=255) gCAGAAGGCCATCCTGACGGATGGCCTTTATGGATTGGCGCAGAAAAAAATGCCGGATGCGACGCTg > 1:10006256/1‑67 (MQ=255) cAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgc > 1:31986287/1‑68 (MQ=255) cAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGgc > 1:43970412/1‑68 (MQ=255) | GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGACGCTGGC > CP009273/4034124‑4034241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |