| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4583141 = | NA (NA) | 19 (0.040) | 7/90 | NT | NA | intergenic (+12/+37) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter |
| ? | CP009273 | 4583171 = | NA (NA) | intergenic (+42/+7) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter | |||||
Only 100 of 719 total aligned reads displayed.
CTGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583074‑4583208 | tGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAAt > 1:33915331/1‑68 (MQ=255) ggcactggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttAt < 1:34354286‑M1/2‑1 (MQ=255) cgccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATg > 1:42449235/1‑67 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:40646460/1‑67 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:29223999/1‑67 (MQ=255) actggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGcc > 1:46868121‑M1/63‑67 (MQ=255) actggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGcc > 1:13121789‑M1/63‑67 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:37756939‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:22742408‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:44789679‑M1/62‑68 (MQ=255) ggcgtacatcttcctgtttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt < 1:23602151‑M1/9‑1 (MQ=255) ggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt > 1:28086113‑M1/60‑68 (MQ=255) ggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt > 1:13916502‑M1/60‑68 (MQ=255) cgtacatcttcctggttcgtcagccggtcaacgccccccgtaaagatttatctccttATGGccgagaa < 1:11484001‑M1/11‑4 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:29510472/68‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:6294303/68‑1 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCat > 1:44591411/1‑67 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:47804177/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:49824713/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:42017136/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:18354977/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:24564816/1‑68 (MQ=255) ggCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaaa < 1:4397781/68‑1 (MQ=255) ccGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt < 1:30732700/67‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:21665887/68‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt > 1:41479270/1‑68 (MQ=255) cAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCg > 1:3221486/1‑68 (MQ=255) tAGCTAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:31067052/66‑1 (MQ=255) tAGCGAGGATAACTGGGAAACTTTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:45180451/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAACATGCCCGATAAGCAAAATGTTATCggg < 1:20586883/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:2110808/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:43127578/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:13595440/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:49392577/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:14548555/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:42653554/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:15486836/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:50588402/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:33003467/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:33294804/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:6698000/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:38601105/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:46507743/66‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:4001116/66‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:10307316/66‑1 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAg > 1:18861036/1‑68 (MQ=255) gaggagAACTGAGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATaa < 1:24050242/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:692971/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:27800909/67‑1 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg < 1:10078756/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:16916472/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:25921768/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:24983379/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:22115015/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:35090697/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:35727811/67‑1 (MQ=255) agaACTCGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:45770507/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:28382981/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:50898688/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:26473036/67‑1 (MQ=255) tGGGAAAGATTTTAATCTCCATGATAATGCCCGATTAGAAAAATCTTATCGGGCATATGGAGATTAAt < 1:20267504/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:8637601/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:12079123/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:5384211/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:36275031/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:30141190/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:12607982/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAATATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:21938548/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:19734566/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:19098644/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:31726852/68‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCTGGCATAAGGAGATTAATCtt > 1:41225525/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:14942568/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:38944906/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:25492923/1‑68 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:32581675/67‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:27047700/67‑1 (MQ=255) aCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTAc > 1:7387637/1‑68 (MQ=255) cATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACg > 1:10862497/1‑68 (MQ=255) aaagattaatctccttATGCCCGATAAGCAAAATGTTTTCGGGCATAAGGAGATTAATCTTTACGTgg < 1:31249633‑M1/52‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:8415347/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:49051764/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:28756686/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:26676356/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:17229120/68‑1 (MQ=255) aaTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTc < 1:19484565/68‑1 (MQ=255) attaatctccttATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg < 1:5976899‑M1/56‑1 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:23172076/1‑68 (MQ=255) tCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGt > 1:9519771/1‑68 (MQ=255) tCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGt < 1:34907446/68‑1 (MQ=255) tCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGt < 1:7603381/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:51248568/68‑1 (MQ=255) aaaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCg > 1:50218241/1‑66 (MQ=255) aaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGc < 1:48630208/67‑1 (MQ=255) aaaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGc < 1:36662599/67‑1 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:17830380/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:3939132/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:817237/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:37108433/1‑68 (MQ=255) ATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGa > 1:1640678‑M1/1‑68 (MQ=255) | CTGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583074‑4583208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |