| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 546011 = | 435 (0.700) | 22 (0.040) | 11/96 | NT | 5.6% | coding (117/894 nt) | ybcF | putative carbonate kinase |
| ? | CP009273 | 546053 = | 373 (0.700) | coding (159/894 nt) | ybcF | putative carbonate kinase | |||||
Only 100 of 662 total aligned reads displayed.
TGAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGA > CP009273/545945‑546078 | acatccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcg < 1:31547979‑M1/1‑1 (MQ=255) gAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTgg < 1:6932834/67‑1 (MQ=255) gAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTgg < 1:34855465/67‑1 (MQ=255) gAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTgg < 1:26103052/67‑1 (MQ=255) catccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGc > 1:50960028‑M1/66‑68 (MQ=255) catccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGc > 1:32502554‑M1/66‑68 (MQ=255) catccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGc > 1:26560490‑M1/66‑68 (MQ=255) catccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGc > 1:25481569‑M1/66‑68 (MQ=255) atccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGc < 1:22658676‑M1/3‑1 (MQ=255) tccagcggttacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGccc > 1:11604241‑M1/64‑68 (MQ=255) tccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGccc > 1:3607426‑M1/64‑68 (MQ=255) tccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGccc > 1:14038069‑M1/64‑68 (MQ=255) tccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGccc < 1:33934754‑M1/5‑1 (MQ=255) tccagcggatacggttctacctctttccacgccagagtctgcaatgccagcagccccacctgcGGccc < 1:47980898‑M1/5‑1 (MQ=255) ggCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGccc > 1:37922226/1‑68 (MQ=255) ccagcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGCCCg < 1:14641957‑M1/6‑1 (MQ=255) gcTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGtt > 1:19155273/1‑68 (MQ=255) gcTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGt < 1:39246871/67‑1 (MQ=255) gcTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGt < 1:3039541/67‑1 (MQ=255) agcggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctgcGGCCCGtt < 1:4233700‑M1/8‑1 (MQ=255) tGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCt < 1:4707741/68‑1 (MQ=255) tGACCGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTc < 1:37375337/67‑1 (MQ=255) cggatacggttctacctctttccacgccagattctgcaatgccagcagccccacctccGGCCCGTTc < 1:35403281‑M1/9‑1 (MQ=255) gCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCg > 1:36546367/1‑68 (MQ=255) gAAAATCAATGTCGCAATATCGCCAGTGCTGTACACGCGCTGGCACGCCTGGCCCGTTCTTATCTGtt > 1:50614207/1‑68 (MQ=255) aaaTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGt < 1:39751738/65‑1 (MQ=255) aaaTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGt < 1:19866058/65‑1 (MQ=255) aaaTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGt < 1:20206008/65‑1 (MQ=255) aaaTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGt < 1:13814490/65‑1 (MQ=255) aaaTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGt < 1:12657892/65‑1 (MQ=255) aTCAATATCGCAATATCGCCAGTGCTTTACCCGCGGTGGCACGCCTGGCCCGTTCTTATCGGTTGGCg < 1:49703681/68‑1 (MQ=255) aTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCg < 1:43346475/68‑1 (MQ=255) aTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCg < 1:47514991/68‑1 (MQ=255) aTCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCg < 1:22297655/68‑1 (MQ=255) tatcgcaatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGt < 1:38849905/68‑1 (MQ=255) tatcgcaatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGt < 1:10100736/68‑1 (MQ=255) atcgcaatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGt > 1:10396016/1‑67 (MQ=255) atcgcaatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGt > 1:10879628/1‑67 (MQ=255) gcaatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCAc > 1:24420677/1‑68 (MQ=255) cacgccagattctgcaatgccagcagccccacctgcGGCCCGTTCTTATCGGTTGGCGATTGTTCACg > 1:13583380‑M1/37‑68 (MQ=255) cacgccagattctgcaatgccagcagccccacctgcGGCCCGTTCTTATCGGTTGGCGATTGTTCACg > 1:15448041‑M1/37‑68 (MQ=255) aatatcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACg < 1:44534004/67‑1 (MQ=255) atcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCa > 1:29456991/1‑67 (MQ=255) atcgcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCa > 1:4168988/1‑67 (MQ=255) gcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACgg > 1:30727489/1‑68 (MQ=255) gcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACgg > 1:1222016/1‑68 (MQ=255) gcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACgg > 1:6402141/1‑68 (MQ=255) gcCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACgg > 1:5697784/1‑68 (MQ=255) ttctgcaatgccagcagccccacctgcGGCCCGGTGTTATGGGGTGGCGATTGTTCGCGGCACCggg < 1:8809215‑M1/40‑1 (MQ=255) cAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACggg < 1:27078469/67‑1 (MQ=255) cAGTGCTGGACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACggg < 1:21815055/67‑1 (MQ=255) gTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGcc > 1:16751718/1‑67 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGcc < 1:17732950/65‑1 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGcc > 1:5539164/1‑65 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGcc < 1:43945260/65‑1 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:17220383/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:29913060/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:27981642/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:7898779/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:46301147/1‑68 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAgg < 1:48761358/68‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAgg > 1:320814/1‑68 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:38251049/67‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:9671131/67‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:25029888/67‑1 (MQ=255) gTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGt < 1:1633017/68‑1 (MQ=255) gTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGt < 1:45664058/68‑1 (MQ=255) gccagcagccccacctgcGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg < 1:19421490‑M1/50‑1 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCCCGGCAACGGGCCGCAGGTgg > 1:37052628/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:36827530/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:9086196/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:16066619/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:18814132/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:20469090/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:20947288/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:23955020/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:35642713/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:3337048/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:40651907/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:25165075/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGGTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:13003640/1‑68 (MQ=255) cccGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTggg > 1:48559683/1‑68 (MQ=255) ccgcgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTggg > 1:6241581‑M2/10‑67 (MQ=255) ccgcgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGAGTGTTCACGGCAACGGGCCGCAGGTggg > 1:40350751‑M2/10‑67 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:14466208‑M2/7‑67 (MQ=255) gctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgctg < 1:28428095‑M2/62‑1 (MQ=255) gctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgctg < 1:23385514‑M2/62‑1 (MQ=255) ctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:28891135‑M2/5‑65 (MQ=255) ctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:2297032‑M2/5‑65 (MQ=255) ggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTgg < 1:42939699‑M2/66‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGc < 1:14972327/67‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCa > 1:46738480/1‑68 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCa > 1:45245730/1‑68 (MQ=255) cGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAtt < 1:31034011/68‑1 (MQ=255) cGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAtt < 1:32985186/68‑1 (MQ=255) ctgcGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAtt < 1:41080478‑M1/63‑1 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGc < 1:51261942/67‑1 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGc < 1:44822840/67‑1 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCa > 1:18356521/1‑68 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCa > 1:27498726/1‑68 (MQ=255) | TGAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGA > CP009273/545945‑546078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |