| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 546011 = | 435 (0.700) | 22 (0.040) | 11/96 | NT | 5.6% | coding (117/894 nt) | ybcF | putative carbonate kinase |
| ? | CP009273 | 546053 = | 373 (0.700) | coding (159/894 nt) | ybcF | putative carbonate kinase | |||||
Only 100 of 731 total aligned reads displayed.
TGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGATGTG > CP009273/545987‑546119 | gcaatgccagcagccccacctgcGGCCCGGGCTTATCGGTTGGGGATTGTTCGCGGCAACGGGCCGCa < 1:9732732‑M1/45‑1 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGc < 1:39456300/67‑1 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:22542187/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:17220383/1‑68 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa < 1:41914972/68‑1 (MQ=255) gCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCa > 1:43388808/1‑68 (MQ=255) cTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg > 1:46314731/1‑68 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAgg > 1:13120228/1‑68 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAgg < 1:19555307/68‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:39948658/67‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:48640335/67‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:38158379/67‑1 (MQ=255) tGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAg < 1:36584953/67‑1 (MQ=255) aCCCGCGCTGGCCCGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:44443546/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCCCGGCAACGGGCCGCAGGTgg > 1:37052628/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:13618086/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:29416019/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:3337048/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:18861064/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:37424779/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:47318805/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATGGTTCACGGCAACGGGCCGCAGGTgg > 1:39056225/1‑68 (MQ=255) aCCCGCGCTGGCACGCCTGGCCCGTGCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTgg > 1:23372860/1‑68 (MQ=255) cccGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTggg > 1:45882685/1‑68 (MQ=255) ccgcgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTggg > 1:6663348‑M2/10‑67 (MQ=255) ccgcgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTggg > 1:2521164‑M2/10‑67 (MQ=255) cgcgcgggCACGCCTGGCCCGATCGCCTCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgc < 1:19352009‑M2/60‑1 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATGGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:10818446‑M2/7‑67 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:10182710‑M2/7‑67 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:16861202‑M2/7‑67 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:4491154‑M2/7‑67 (MQ=255) cgctggCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGgct > 1:26357941‑M2/7‑67 (MQ=255) agccccacctgcggcccgttgccgtgaacaatcgccaaccgataagaccgggccGCAGGTGGGgct < 1:20503075‑M2/12‑1 (MQ=255) ccacctgcggcccgttgccgtgaacaatcgcaaaccgataagaacgggccGCAGGTGGGGCTGCTGGc < 1:34061137‑M2/18‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGc < 1:48243255/67‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGc < 1:17505569/67‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGc < 1:3862803/67‑1 (MQ=255) cACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCa > 1:5958567/1‑68 (MQ=255) aCGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAt > 1:12129035/1‑68 (MQ=255) aCGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAt > 1:16215390/1‑68 (MQ=255) cGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCAtt < 1:8892483/68‑1 (MQ=255) tgcggcccgttgccgtgaacaacccccacccgataacaacgggccGCAGGTGGGGCTGCTGGCATTGc < 1:25056762‑M2/23‑1 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCa > 1:24319099/1‑68 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCa > 1:44008543/1‑68 (MQ=255) cTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCa > 1:31837290/1‑68 (MQ=255) GGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGa < 1:35632904‑M1/68‑1 (MQ=255) GGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGa > 1:28082453‑M1/1‑68 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGt > 1:14093408‑M1/1‑46 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGaa < 1:16594784‑M1/67‑1 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGaa < 1:40586277‑M1/67‑1 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGaa > 1:13982620‑M1/1‑67 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGaa < 1:5464211‑M1/67‑1 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGaa < 1:32627622‑M1/67‑1 (MQ=255) CCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGAATTGCAGaa < 1:3420943‑M1/67‑1 (MQ=255) CCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAAt > 1:618774‑M1/1‑67 (MQ=255) CCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAAt > 1:27283954‑M1/1‑67 (MQ=255) TCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTgg > 1:47047957‑M1/1‑67 (MQ=255) TCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTgg > 1:20327211‑M1/1‑67 (MQ=255) TCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGc < 1:22914184‑M1/68‑1 (MQ=255) TCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGc < 1:50789415‑M1/68‑1 (MQ=255) cTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCg < 1:15166715/68‑1 (MQ=255) aTCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTgg < 1:28432881/68‑1 (MQ=255) tCGGTTGGGGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa < 1:27773817/68‑1 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa < 1:33727003/68‑1 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa < 1:48743928/68‑1 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa > 1:51299804/1‑68 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa < 1:41512588/68‑1 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa > 1:29816416/1‑68 (MQ=255) tCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGa < 1:21915231/68‑1 (MQ=255) cGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGaa > 1:21044178/1‑68 (MQ=255) cGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGaa > 1:15927088/1‑68 (MQ=255) cGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGaa > 1:46624298/1‑68 (MQ=255) gTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAag > 1:32928183/1‑68 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagat < 1:50202232/68‑2 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:42505305/68‑1 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:1456249/68‑1 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:5778576/68‑1 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:25711091/68‑1 (MQ=255) tGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:30584874/68‑1 (MQ=255) tGGCGATTGTTCACGGAAACGGGCCGCAGGTGGGGCTGATGGCATTGCAGAATCTGGCGTGGAAagag < 1:49553123/68‑1 (MQ=39) ggCGATTGTTCACGGCATCGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAgg < 1:12673513/68‑1 (MQ=255) ggCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAagag < 1:28979249/67‑1 (MQ=255) cGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGt < 1:744728/67‑1 (MQ=255) cGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGt < 1:18469495/67‑1 (MQ=255) cGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGt < 1:31372389/67‑1 (MQ=255) cGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTa > 1:35949442/1‑68 (MQ=255) aTTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGa > 1:45460937/1‑68 (MQ=255) ttGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGa < 1:41013899/67‑1 (MQ=255) ttGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGa < 1:9292972/67‑1 (MQ=255) tCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCg < 1:12593504/67‑1 (MQ=255) tCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGt < 1:7908801/68‑1 (MQ=255) ggCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATcc < 1:17975907/68‑1 (MQ=255) gCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGAGTGGAAAGAGGTAGAACCGTATcc > 1:42977890/1‑67 (MQ=255) cAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCg < 1:26828015/67‑1 (MQ=255) cAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCg < 1:30998705/67‑1 (MQ=255) acgggccGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTg > 1:23780239‑M2/8‑68 (MQ=255) cgggccGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTgg < 1:35073538‑M2/62‑1 (MQ=255) gggccGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTAACCGCTGGa > 1:11604241‑M2/6‑68 (MQ=255) gccGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGAtg > 1:19902072‑M2/4‑68 (MQ=255) gccGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGAtg > 1:32407436‑M2/4‑68 (MQ=255) | TGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGATGTG > CP009273/545987‑546119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |