| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 678193 | 262 (0.420) | 13 (0.030) | 7/94 | NT | 5.5% | coding (657/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription |
| ? | CP009273 | = 678254 | 231 (0.440) | coding (596/1671 nt) | hscC | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription | |||||
Only 100 of 303 total aligned reads displayed.
ATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 | ttttGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACAt < 1:35180764/68‑1 (MQ=255) ttGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATcc > 1:21524683/1‑68 (MQ=255) gCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCcgc > 1:415585/1‑68 (MQ=255) gCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCcgcgcg < 1:17454193/68‑1 (MQ=255) ttCCACCCAGGCGTACAAGGCTGCCAGTTCACGCTCGTTAAGCGTGGTCCTGGCTACATCCGCGCGtt < 1:18103181/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:15717092/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:40767875/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:48712318/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:13056559/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:43539495/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:42777128/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:6615219/68‑1 (MQ=255) ttCCACACAGGCGTACAAGGCTGCCAGTTCACTCCCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:47759893/68‑1 (MQ=255) gtCCCCACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtt < 1:14967734/67‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:27130657/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:16522876/68‑1 (MQ=255) tCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGttt < 1:27532611/68‑1 (MQ=255) ccACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGtttt < 1:19841973/68‑1 (MQ=255) acaGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTaaa > 1:26408297/1‑67 (MQ=255) caGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGGCAacgttgttggtggcgaa > 1:48580618‑M1/1‑51 (MQ=255) ggCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAAcc > 1:29457454/1‑67 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAAcc < 1:33368739/65‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:2090993/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:3440665/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCt < 1:13905935/66‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:50712284/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:41711024/67‑1 (MQ=255) cGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:34111180/67‑1 (MQ=255) cGTACAAAGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTc < 1:42340320/67‑1 (MQ=255) aCAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCg > 1:33998384/1‑68 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:41189007/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:49712612/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:39900623/68‑1 (MQ=255) cAAGGCTGCCAGTTCACTCTCGTTAAGCGGGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:1210553/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacc < 1:450459‑M1/68‑27 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:18409137/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa > 1:145023/1‑67 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:32506512/68‑1 (MQ=255) aaGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGAc < 1:46666677/68‑1 (MQ=255) aGGCTGCCAGTTCTCTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGa < 1:3126561/66‑1 (MQ=255) cTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAg < 1:26145003/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCTCGCTTTTTAAAACCTCATCGACCAGc < 1:21811036/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:47133341/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:5184020/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:46081920/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:43792274/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1085915/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:30089499/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:26278347/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:24500973/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:28574108/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:14103244/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:29756999/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:10629899/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:23827683/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:1706456/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:18771944/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:23379455/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:31649688/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:21298427/67‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:48842026/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:39680321/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:5022223/68‑1 (MQ=255) tGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCa < 1:25032053/68‑1 (MQ=255) tGCCAGCTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGc < 1:47874533/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTGCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:45126859/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:7240796/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:20307936/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:47566398/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:5402437/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:34704287/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATggg < 1:8823602/67‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg < 1:37051491/66‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATgg < 1:27029890/66‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGt < 1:37701072/68‑1 (MQ=255) tCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGGTTTAAAACCTCATCGACCAGCATATggg < 1:7981192/67‑1 (MQ=255) ctcGTTAAGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatga > 1:8621580‑M1/1‑25 (MQ=255) cGTTAAGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgagg > 1:5770242‑M1/1‑23 (MQ=255) cGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCt < 1:42166372/68‑1 (MQ=255) aGCGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggtttta > 1:35886487‑M1/1‑18 (MQ=255) aGCGTGGTCCTGGCGACATCCGGGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGc > 1:212020/1‑67 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:13646‑M1/1‑16 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:5213820‑M1/1‑16 (MQ=255) cGTGGTCCTGGCGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaa > 1:44391309‑M1/1‑16 (MQ=255) cGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGcca > 1:361637/1‑67 (MQ=255) gTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacc < 1:5563579/68‑1 (MQ=255) gTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacc < 1:40194995/68‑1 (MQ=255) ggTCCTGGCTAAATCCGCGCGTTTTAAATCCTCATCGACCAGCATATGGGTTAAATCTTCGcgaccta < 1:43054366/68‑3 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:9064573/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:48432062/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:39553232/67‑1 (MQ=255) ggTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGccacca < 1:36693241/67‑1 (MQ=255) ccTGGCGACCTCCGCGCGTTTTAAAACCTCATCGACCAGCTTATGGGGAAAATCTTCGCCACCAAGaa > 1:38423816/1‑68 (MQ=255) ggCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGt < 1:25626594/68‑1 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:24222807‑M1/1‑5 (MQ=255) cGACAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatg > 1:29988823‑M1/1‑5 (MQ=255) cAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatgtcg < 1:23401576‑M1/68‑67 (MQ=255) cAactttcttggtggcgaagattttacccatatgctggtcgatgaggttttaaaacgcgcggatgtcg < 1:44715372‑M1/68‑67 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:12366328‑M2/1‑63 (MQ=255) cATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTtgtcg > 1:46938319‑M2/1‑63 (MQ=255) | ATTTTGCCGCTTCCACACAGGCGTACAAGGCTGCCAGTTCACTCTCGTTAAGCGTGGTCCTGGCGACATCCGCGCGTTTTAAAACCTCATCGACCAGCATATGGGTAAAATCTTCGCCACCAAGAAAGTTGTCG > CP009273/678126‑678259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |