New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1821389431 (0.700)20 (0.040) 10/94 NT 5.6% coding (1128/1344 nt) astB succinylarginine dihydrolase
?CP009273 = 1821423 310 (0.600)coding (1094/1344 nt) astB succinylarginine dihydrolase

Only 100 of 653 total aligned reads displayed.

CACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA  >  CP009273/1821323‑1821455
                                                                  |                                                                  
cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt                                                                   <  1:5591171/68‑1 (MQ=255)
cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt                                                                   <  1:32587340/68‑1 (MQ=255)
cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT                                                                    >  1:41767873‑M1/1‑67 (MQ=255)
  cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 <  1:22230207/68‑1 (MQ=255)
  cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 >  1:45045079/1‑68 (MQ=255)
  cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 >  1:17652597/1‑68 (MQ=255)
   ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 >  1:11206996/1‑67 (MQ=255)
   ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 >  1:38281598/1‑67 (MQ=255)
    cAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 >  1:12869433/1‑66 (MQ=255)
      gTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct                                                              >  1:11675580/1‑67 (MQ=255)
      gTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct                                                              >  1:9295505/1‑67 (MQ=255)
        cATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct                                                              >  1:17971634/1‑65 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:50801641/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:28822650/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:2914914/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:20502766/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:25557908/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:21572622/68‑1 (MQ=255)
         aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg                                                          <  1:39343567/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:31158035/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:19792595/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:30143177/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:3219804/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:3438756/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:1406868/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:10157007/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTACTGt                                                         <  1:2815756/68‑1 (MQ=255)
          ttGAGCGCATTAAACAGCGTATCGTTAATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:2719597/68‑1 (MQ=255)
           tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc                                                        <  1:26095117/68‑1 (MQ=255)
           tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc                                                        >  1:9048965/1‑68 (MQ=255)
           tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc                                                        <  1:7385910/68‑1 (MQ=255)
           tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc                                                        >  1:20911164/1‑68 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCCCCGCCGGATTCACCGCCCGGCGTgcctgcgggtgggg                                                      >  1:37927375‑M1/1‑54 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTGTTCTTCTGTCaa                                                      >  1:30546205/1‑68 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:49485681/1‑68 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:43022202/1‑68 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:26819190/1‑68 (MQ=255)
             aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTACTGTCaa                                                      >  1:40968812/1‑68 (MQ=255)
                  aTTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATacc                                                  <  1:15488918/67‑1 (MQ=255)
                   ttAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATaccac                                                <  1:22957226/68‑1 (MQ=255)
                       aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc                                            >  1:37696515/1‑68 (MQ=255)
                        cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTgcctgggggtgcgggtgggattgac                                           >  1:50310946‑M1/1‑43 (MQ=255)
                        cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:13900512/1‑68 (MQ=255)
                        cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:28549163/1‑68 (MQ=255)
                        cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:36418127/1‑68 (MQ=255)
                        cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:33488171/1‑68 (MQ=255)
                        cAGCGTATAGTTCATCATAACCGCCGGATTAAAAGCCCGGCGTTCTTCTTCTGTCAATACAAACCGCa                                           >  1:15929631/1‑68 (MQ=255)
                         aGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:46902041/1‑67 (MQ=255)
                          gCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc                                         <  1:47324776/68‑1 (MQ=255)
                            gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAcc                                        <  1:44020758/67‑1 (MQ=255)
                            gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAcc                                        >  1:39878898/1‑67 (MQ=255)
                            gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc                                         <  1:1315309/66‑1 (MQ=255)
                              aTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCa                                     >  1:42297743/1‑68 (MQ=255)
                              aTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCa                                     >  1:47773885/1‑68 (MQ=255)
                              aTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCa                                     >  1:35441626/1‑68 (MQ=255)
                               tCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCCCCCGCAACCGCAg                                    >  1:29655521/1‑68 (MQ=255)
                                 gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:624102/1‑68 (MQ=255)
                                 gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  <  1:24775287/68‑1 (MQ=255)
                                 gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:11988399/1‑68 (MQ=255)
                                   tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac                                <  1:33835142‑M2/68‑3 (MQ=255)
                                    catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg                               >  1:14930317‑M2/1‑65 (MQ=255)
                                      tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                             <  1:36018303‑M2/68‑6 (MQ=255)
                                        atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                           <  1:51078924‑M2/68‑8 (MQ=255)
                                         tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCCCCCGCCGCCGCAGGCacgccgg                           <  1:14447203‑M2/67‑8 (MQ=255)
                                         tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                           <  1:44599470‑M2/67‑8 (MQ=255)
                                         tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                           <  1:17031701‑M2/67‑8 (MQ=255)
                                           aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:6694653/1‑68 (MQ=255)
                                            ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCCATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:8440328/1‑67 (MQ=255)
                                                cgGATTCACCGCCCGGCGTTCTTCTTCTTTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccg                    >  1:33099725/1‑67 (MQ=255)
                                                 ggATTCACCACCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc                  <  1:10686261/68‑1 (MQ=255)
                                                     tCACCGCCCGGCGTTCTTCTTCTGTCAATACCCCCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc              >  1:31712599/1‑68 (MQ=255)
                                                      cACCGCCCGGCGTTCTTCTTCTGTCAATACCAGCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc              >  1:40295431/1‑67 (MQ=255)
                                                      cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc              >  1:30986444/1‑67 (MQ=255)
                                                        cggccCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcg            >  1:2419785‑M2/3‑45 (MQ=255)
                                                         cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa          >  1:12448118/1‑68 (MQ=255)
                                                         cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa          <  1:45415485/68‑1 (MQ=255)
                                                          gCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt         <  1:43485419/68‑1 (MQ=255)
                                                           cccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        >  1:44491059‑M1/1‑8 (MQ=255)
                                                            ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       <  1:40799271‑M1/68‑62 (MQ=255)
                                                            ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       <  1:8122206‑M1/68‑62 (MQ=255)
                                                            ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       >  1:46358055‑M1/1‑7 (MQ=255)
                                                            ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        <  1:18264777‑M1/67‑61 (MQ=255)
                                                            ccGGCGTTCTTGTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATg        <  1:6971666/67‑1 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCCCCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:27848619/68‑1 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtga        >  1:20762753‑M2/1‑41 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:48710966/68‑1 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:18786567/68‑1 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCACCCCCACCCGCAGGCacgccgggcggtgaatccggcggtga        >  1:23246633‑M2/1‑41 (MQ=255)
                                                            ccGGCGTTCTTCTTCTGTCAATACCACCCCCAACCGCAGGCacgccgggcggtgaatccggcggtga        >  1:38759751‑M2/1‑41 (MQ=255)
                                                             cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:42627209/68‑1 (MQ=255)
                                                             cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:9662714/68‑1 (MQ=255)
                                                              ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgctga     <  1:49708034‑M1/68‑64 (MQ=255)
                                                              ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatga     <  1:21986632‑M1/68‑64 (MQ=255)
                                                               gCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgat    >  1:49201939‑M1/1‑4 (MQ=255)
                                                               gCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCtt     >  1:36992747/1‑67 (MQ=255)
                                                                cGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatg   >  1:48264819‑M1/1‑3 (MQ=255)
                                                                cGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgat    <  1:2520499‑M1/67‑65 (MQ=255)
                                                                 gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga  >  1:17537550‑M1/1‑2 (MQ=255)
                                                                 gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc   >  1:23814884/1‑67 (MQ=255)
                                                                 gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa  <  1:16810740/68‑1 (MQ=255)
                                                                  |                                                                  
CACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA  >  CP009273/1821323‑1821455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.