| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 301 (0.840) | 23 (0.070) | 8/98 | NT | 7.5% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 303 (0.960) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:20038195/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:19839233/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:13851103/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:6617103/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:17602778/67‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:9227468/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:12612006/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:28561863/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:28604042/68‑1 GTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:18681518/67‑1 GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG < 1:17345394/67‑1 CGCCATTGTGCTCTGTAAGCGAGTATTTACTTATTCAATATGCTGGCGCATATTAGCCCGCAGATTGA > 1:26580726/1‑68 ATTGTGCTCTGTAAGCGAGTATTTACATCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAA > 1:23510734/1‑68 GTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGGGCATATTCGCCAGCAGATTGAAGAAGga > 1:8321999/1‑66 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGATGAAGTAAA > 1:9596649/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:27170241/1‑68 TCTGTAAGCGCGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCTGATTGAAGAAGTAAAT > 1:21755895/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCTTATTCGCCAGCAGATTGAAGAAGTAAATA > 1:8371396/1‑68 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCTGGTTGAAGATGTTAAg > 1:7585334/1‑66 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:16437423/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:7501859/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:8066414/1‑67 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:12076564/1‑68 cgcGTATTTACTTCTTCAATCTGCTGGCGGGTATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:22314669/4‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:27157764/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:28788436/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:10412119/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:22144102/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:1190711/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:16489031/1‑67 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGGAGATTGAAGAAGTAAATACTCGCTTACA > 1:17881866/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:6915757/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:6059446/1‑68 ACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACA > 1:11487372/1‑68 AATCTGCTGGCGCATATTCGCCCGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCTCAATGGCGCT > 1:12078982/1‑68 CTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTC > 1:12534971/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:10089776/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:25454471/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:25580404/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:21064346/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:20303632/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:16075461/1‑67 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA < 1:9395244/68‑1 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA > 1:24478947/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGGGCGAGC > 1:6068771/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:482967/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:29752052/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:15592988/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:17734031/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:18478978/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:25318826/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:10412223/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAG < 1:5134019/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:9747290/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:26088960/67‑1 GCATAATCGCCAGCAGATAGAAGAAGTAAATACTCGCTTACAGAGCCCAATGGCGCTTCGCGCGAGC < 1:21539964/67‑1 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |