| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 301 (0.840) | 23 (0.070) | 8/98 | NT | 7.5% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 303 (0.960) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 395 total aligned reads displayed.
ATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTTGTGCC > CP009273/410221‑410355 | aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATg < 1:13891774/68‑1 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:10412223‑M2/1‑66 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:29752052‑M2/1‑66 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:7372606/68‑1 (MQ=255) aGCGCCATTGTGCGCTGTAAGCGAGTATTTACTTCTTCAATCTGCTAGCGAATATGCGCCAGcgctgc < 1:29237228/68‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:23143653/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:17320193/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:27961199/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:8947302/67‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:7621417/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:19923147/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:18853750/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:24429760/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:6683141/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:29615306/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:10715325/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:5334449/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtg < 1:12039864/67‑1 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:11156145/1‑68 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:17107625/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:21070430/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:27101745/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:6110080/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCCCTgtgt < 1:21559810/68‑1 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagt > 1:11487372‑M2/1‑48 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCCGCGCCGCGCTgtgt > 1:20624991/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:11702312/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTAATTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:7244392/1‑67 (MQ=255) gtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTc < 1:15965922/68‑1 (MQ=255) gCTCTGTAAGCTATTATTTTATTCTTCAATCTGCTGGCGATTCTGATCAAGCTCAGCGCTGTGGTCt < 1:19003337/67‑1 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt < 1:14263393/67‑1 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:8261552/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt < 1:10259154/67‑1 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCGGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:20096322/1‑67 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGc < 1:4609717/67‑1 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:17961455/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:22334632/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:16006718/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:9447366/1‑68 (MQ=255) ctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGa < 1:4470267/68‑1 (MQ=255) ctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGa < 1:24628599/68‑1 (MQ=255) tGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatact > 1:6059446‑M2/1‑41 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:16895673/1‑67 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:6264269/68‑1 (MQ=255) gTAAGCGAGTATTCACTTCTTCTATCTGCTGGCGAATATGCGACAGCGCCGCGCTGTGTTCTGCGATg < 1:4184831/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:22144102‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:1190711‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:16489031‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:28349858/1‑68 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:9718487/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:4812565/68‑1 (MQ=255) aGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGt > 1:18392109/1‑68 (MQ=255) cGAGTTTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:25155244/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:27580759/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:27795342/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:10072816/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:16169127/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:3150701/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:23472773/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:3842168/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:18465010/1‑67 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCTAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTcc < 1:2122477/68‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:28224276/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:9331976/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:2736927/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:1243287/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:22960587/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTcc < 1:5606392/68‑1 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:4833701/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:21394522/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:28768717/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:22656058/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:861358/1‑68 (MQ=255) tATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAg > 1:3445898/1‑68 (MQ=255) aTTTACTTCTTCACTCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:589914/68‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:7501859‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:13436399/68‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAg < 1:12127582/67‑1 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:28316943/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:26004265/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg < 1:18509328/68‑1 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:12973909/1‑68 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGa < 1:25632577/68‑1 (MQ=255) cttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:19550921/54‑1 (MQ=255) ttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGaa < 1:10146222/68‑1 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:26268032/1‑67 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:1541089/1‑67 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:14098065/1‑67 (MQ=255) ctgctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTc > 1:28811143/1‑68 (MQ=255) tgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTg < 1:12539544/67‑1 (MQ=255) cGAATATGCGCCTGCGCCGCGCTGTGTGCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGcctg < 1:24073756/68‑3 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:25910007/67‑1 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:21261968/67‑1 (MQ=255) aaTATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGtt > 1:19367132/1‑68 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:25417562/68‑1 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:7942880/68‑1 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:17585959/68‑1 (MQ=255) atGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt > 1:26842320/1‑67 (MQ=255) atGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt > 1:24219740/1‑67 (MQ=255) gcgcCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTTGTGcc > 1:14968695/1‑68 (MQ=255) | ATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTTGTGCC > CP009273/410221‑410355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |