| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1980922 | 208 (0.580) | 14 (0.050) | 8/92 | NT | 7.4% | intergenic (+13/+66) | ftnB/yecJ | ferritin B, putative ferrous iron reservoir/uncharacterized protein |
| ? | CP009273 | = 1980931 | 177 (0.600) | intergenic (+22/+57) | ftnB/yecJ | ferritin B, putative ferrous iron reservoir/uncharacterized protein | |||||
Only 100 of 193 total aligned reads displayed.
GGTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1980847‑1980922‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcggcgcAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < CP009273/1980931‑1980866 GGTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATC > 1:16421157/1‑68 GTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATC < 1:14819888/67‑1 TATGTGCCCTGTGCAGACCGACCTACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCA < 1:6669397/67‑1 TGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCG < 1:9286566/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:12411936/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:13655844/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:18621278/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:19259844/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:11072851/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:8533142/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:8710212/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCG < 1:24539932/68‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC < 1:25820056/67‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:1991447/1‑67 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC < 1:17213236/67‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC < 1:27394363/67‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:25288850/1‑67 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC < 1:28011035/67‑1 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:17892821/1‑67 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:4741184/1‑67 GCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:24140719/1‑67 GCCCGGTGCAGACCGACCAACATGTTCTGAATGTCGTGGCACACCAGCTGCATTGATCATCATCGGC < 1:17310995/67‑1 CCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:10777297/1‑66 CCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:26542357/1‑66 CCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGC > 1:19021105/1‑66 TGTGCAGACCGACCATCATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCAAT < 1:28238084/68‑1 CCGACCAACATGTTCTGAATGTCGTGTC‑CACCAGCTGCATTGATCATCATCTGCGGAATGGATTAGCG > 1:6328667/1‑68 ACCAGCTGCATTGATCATCATCGGCGCAATGCATTAGCGCCGCTGATGATCAATGCAGCTGGTGTGA > 1:3166816/1‑67 ACCAGCTGCATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGAC > 1:12925054/1‑68 CAGCTGCATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACAC > 1:7037117/1‑68 TGCATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACCCGACA > 1:2585402/1‑68 TGCATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGAaa > 1:5049058/1‑66 CATTGATCATCATCGGCGCAATGGATTAGGGCCGATGGTGCTCAATGGAGCTGGTGTGGCACGACATT > 1:8805520/1‑68 ATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTC > 1:6514188/1‑68 ATTGATCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTC > 1:5926519/1‑68 TGATCATCATCGGCGCAATGCATTAGCGCCGATGATGGTCAATGCAGCTGGTGTGACACGACATTCAG > 1:29133149/1‑68 TCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAAC > 1:27760390/1‑68 TCATCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAAC > 1:21082096/1‑68 TCATCGGCGCAATGCATTAGCGCCGCTGATGGTCAATGGAGCTGGTGTGACACCACATTCAGATCATG > 1:12051835/1‑68 TCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATG < 1:10234147/68‑1 TCATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATG > 1:17324339/1‑68 CATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGT < 1:25021800/68‑1 ATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTT > 1:8234487/1‑68 ATCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTT > 1:16133400/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:26058721/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:10326652/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:13127706/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:19608428/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:13414387/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:20786618/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG > 1:21193815/1‑68 TCGGCGCAATGCATTAGCGCCGATGATGATCAATGCAGATGGTGTGACACGACATTCAGAACATGTTG > 1:22215683/1‑68 TCGGCCCAATTCATTAGAGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTG < 1:18367296/68‑1 GGCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGG > 1:20902005/1‑67 GCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTC > 1:3526467/1‑68 GCGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTC > 1:1172518/1‑68 CGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCG > 1:10552421/1‑68 CGCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCG > 1:9642594/1‑68 GCAATGCATTAGCGCCGATGATGATGAATGGAGCTTGTGTGAATCGACATTCAGATCATGTTGGTCGG < 1:3873115/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:5575976/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:16553715/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG > 1:15603502/1‑68 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:6069786/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:14987702/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:17014000/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:7272823/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:6785703/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:1280514/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:29452664/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:7722795/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:7939380/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:10977418/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:10735067/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:9045673/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:10492206/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:9754319/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:29693950/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG > 1:23348738/1‑68 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:23689443/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:24014203/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:24343904/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:25273268/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:25451311/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:25493893/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:25599248/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:25722836/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:20583315/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:26897018/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:19321706/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:18121216/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:17840960/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:28568052/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:29132171/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:17596334/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:22517209/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < 1:17425457/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGGCGG < 1:28968600/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGGCGG < 1:4346327/68‑1 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTCGGTCcg < 1:21574188/68‑3 GCAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGGTGGTCGG < 1:20257499/68‑1 GGTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1980847‑1980922‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcggcgcAATGCATTAGCGCCGATGATGATCAATGCAGCTGGTGTGACACGACATTCAGAACATGTTGGTCGG < CP009273/1980931‑1980866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |