| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1980922 | 208 (0.580) | 14 (0.050) | 8/92 | NT | 7.4% | intergenic (+13/+66) | ftnB/yecJ | ferritin B, putative ferrous iron reservoir/uncharacterized protein |
| ? | CP009273 | = 1980931 | 177 (0.600) | intergenic (+22/+57) | ftnB/yecJ | ferritin B, putative ferrous iron reservoir/uncharacterized protein | |||||
Only 100 of 531 total aligned reads displayed.
CCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGTTTTTT > CP009273/1980856‑1980988 | ccTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCt > 1:19855896/1‑68 (MQ=255)ccTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCt > 1:21602352/1‑68 (MQ=255) gCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGc < 1:10255662/68‑1 (MQ=255) gCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGc > 1:11029325/1‑68 (MQ=255) gCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGc > 1:22904698/1‑68 (MQ=255) gCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGc < 1:4682147/68‑1 (MQ=255) cAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCa > 1:20383384/1‑68 (MQ=255) ccgcccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:4346327‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc > 1:15603502‑M2/1‑66 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:17695719‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:169141‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:18316330‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:5371089‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc > 1:22255700‑M2/1‑66 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc > 1:23348738‑M2/1‑66 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:3196537‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:28724843‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:28568052‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:28016733‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:25599248‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:14987702‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:6785703‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgc < 1:10328533‑M2/68‑3 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCGAATTCAttca > 1:11961896/1‑66 (MQ=255) ccgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGCCGCTAATGCATTga < 1:21010983‑M2/68‑3 (MQ=255) ccgaccAACATGATCTGAATGTCCTGTCACACCAGCTGCATTGATCATCAACGGCGCTAAAGCATTgc < 1:18072770‑M2/68‑3 (MQ=255) cgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcg > 1:1465617‑M2/1‑65 (MQ=255) cgaccAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcg > 1:10552421‑M2/1‑65 (MQ=255) cAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcgccga > 1:26058721‑M2/1‑61 (MQ=255) cAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcgccga > 1:7885617‑M2/1‑61 (MQ=255) cATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcgccgatga > 1:17324339‑M2/1‑58 (MQ=255) aTGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGaa > 1:5995309/1‑68 (MQ=255) aTGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGaa > 1:14847968/1‑68 (MQ=255) aTGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGaa > 1:6437705/1‑68 (MQ=255) gTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAgg < 1:29579071/68‑1 (MQ=255) tCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGtt > 1:18630370/1‑68 (MQ=255) tCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGtt > 1:13801066/1‑68 (MQ=255) tCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGt < 1:19422418/67‑1 (MQ=255) tCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGt < 1:21305866/67‑1 (MQ=255) tGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGtttt < 1:22126416/68‑1 (MQ=255) aTGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTgag > 1:27838073/1‑68 (MQ=255) tGTCGGGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcgccgatgatgatcaatgca > 1:2585402‑M2/1‑47 (MQ=255) gTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGaa > 1:7502173/1‑68 (MQ=255) gTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGaa > 1:13178542/1‑68 (MQ=255) gTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGaa > 1:14432544/1‑68 (MQ=255) gtgtCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAAcc < 1:509190/68‑1 (MQ=255) gtCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTgcgccgatgatgatcaatgcagctggt > 1:12925054‑M2/1‑41 (MQ=255) cacaCCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGcg < 1:6299108/67‑2 (MQ=255) cacaCCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTg < 1:827052/68‑1 (MQ=255) cacaCCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTg < 1:5575917/68‑1 (MQ=255) cacaCCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTg < 1:17120030/68‑1 (MQ=255) acacCAGCTGCATTTATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGc < 1:937651/68‑1 (MQ=255) acCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGcc > 1:1590634/1‑67 (MQ=255) ccAGCTGCATTGATCATCATCGGGGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTc > 1:28311752/1‑68 (MQ=255) ccAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTc > 1:11703791/1‑68 (MQ=255) tGCATTGATCATCATCGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgaca > 1:2766097‑M1/1‑21 (MQ=255) tGCATTGATCATCATCGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgaca > 1:27245582‑M1/1‑21 (MQ=255) tGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTg < 1:16498445/68‑1 (MQ=255) gCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGt < 1:662793/68‑1 (MQ=255) gCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGt < 1:24190105/68‑1 (MQ=255) gCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGt < 1:12083870/68‑1 (MQ=255) gCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGt < 1:1403670/68‑1 (MQ=255) cATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGtt > 1:26483166/1‑68 (MQ=255) tGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGa > 1:27371828/1‑68 (MQ=255) gATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGaa > 1:19078954/1‑68 (MQ=255) tcatcatcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAagc < 1:9718406/68‑1 (MQ=255) tcatcatcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAagc > 1:1664773/1‑68 (MQ=255) tcatcatcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAagc > 1:3590451/1‑68 (MQ=255) tcatcatcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAag > 1:10174081/1‑67 (MQ=255) atcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgtt > 1:25785414‑M1/1‑8 (MQ=255) atcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCgg > 1:305877/1‑68 (MQ=255) atcGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAAACGCTGCCTCATCTGTTTGAAGCAGCgg > 1:10757330/1‑68 (MQ=255) tcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttg > 1:20786618‑M1/1‑7 (MQ=255) tcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttg > 1:13414387‑M1/1‑7 (MQ=255) tcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttg > 1:29265553‑M1/1‑7 (MQ=255) tcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttg > 1:24946458‑M1/1‑7 (MQ=255) tcGGCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttg > 1:24412445‑M1/1‑7 (MQ=255) ggCGCaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttgg > 1:20902005‑M1/1‑5 (MQ=255) ggCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATGTGTTTGACGCAGCGGttt > 1:7161301/1‑68 (MQ=255) ggCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGatt > 1:16242246/1‑68 (MQ=255) gcgcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtc > 1:25279890‑M1/1‑4 (MQ=255) cgcTAATGCATTGCGCCGATGAAGGCTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGttttt > 1:25024898/1‑68 (MQ=255) gcaattgattagcgccgatgatgatcaatgcagctggtgtgacactacattcagaacatgttggtcgg < 1:4162679‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:26897018‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:29693950‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:25476868‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:9045673‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:1280514‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:6069786‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:17278401‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:17425457‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:29132171‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:19674745‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:29452664‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:23689443‑M1/68‑67 (MQ=255) gcaatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:24014203‑M1/68‑67 (MQ=255) gcaatccattagcgccgatgattatcaatgcagctggtgtgaaacgacattcagaacatgttggtcgg < 1:12497815‑M1/68‑67 (MQ=255) gcTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGtttttt > 1:880383/1‑68 (MQ=255) gcTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGttttt < 1:9245575/67‑1 (MQ=255) caatgcattagcgccgatgatgatcaatgcagctggtgtgacacgacattcagaacatgttggtcgg < 1:8036494‑M1/67‑67 (MQ=255) | CCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGATCATCATCGGCGCTAATGCATTGCGCCGATGAAGGTTTTGAGAAACCGCTGCCTCATCTGTTTGAAGCAGCGGTTTTTT > CP009273/1980856‑1980988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |