| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2436008 | 299 (0.830) | 21 (0.070) | 7/94 | NT | 8.0% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | = 2436093 | 234 (0.770) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < CP009273/2436093‑2436030 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:23562977/1‑67 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:18023313/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:20895906/68‑1 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:21174904/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:2935608/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:14258360/1‑68 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:2596664/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:18268812/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:21227/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:23504828/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:11820118/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:26126446/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:27658941/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:4612982/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:4945889/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:5023385/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:9471215/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:12697676/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15868639/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:13298588/67‑1 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC < 1:16522263/67‑1 GCTATGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:14077792/1‑67 GGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCAGCTCCGCGCCGggg > 1:26583103/1‑65 AACAGACATTACCGCTCCCCTGCTCCGGGCCGGAATAGCGCCAGCGGCAACACCGCGCTGGCGATgc > 1:26175039/1‑65 CAGACATTACCGCTCCCCTGCTCCGCGCCGGAATAGCGCCGGCGACAACGAGGCGCTGGCAATACCA > 1:14623732/1‑67 CATTACCGCTCCCCTGCTCCGCGGCGTAATAGCGCCAGCGACAACAACGCGCTGGCACTACCCCCGCC > 1:6776408/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACATCAACGCGCTGGCAATGCCACCGCC > 1:27330918/1‑68 ACCGCTCCCCTGCTCCGCGCCGTACTAGCGCCAGCGCCACCCCCGCGCTGGCACTACCACCGCCGATA > 1:24893258/1‑68 ACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATA > 1:6583411/1‑68 CCGCTCCCCTGCTCCGCGGCGTTATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGGCGATAA > 1:4153498/1‑68 CCGCTCCCCTGCTCCGCGGCGTAATAGCGCCAGCGAGAACAACGCGCTGGCAATACCACCGCGGATga > 1:27842650/1‑66 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTGGCAATACCACCGCCGATga > 1:1695820/1‑66 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATTCCACCGCCGATAA > 1:21224875/1‑68 GCTCCCCTGCTCCGCGCCGTAATGGCGCCAGCGACACCAACGCGCTGGCAATACCACCGCCGGTAATC > 1:27294779/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACCACAACGCGCTGGCAATACCCCCGCCGATACTC > 1:22948275/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACACCGCGCTGGCAATACCACCGCCGATAATC > 1:22913444/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATC > 1:42278/1‑68 TCCCCTGCTCCGCGCCGTAATAGCGCCCGCGTCAACAACGCGCTGGCAATTCCACCGCCGAAAATCGC > 1:9771417/1‑68 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGATAATCG > 1:5945250/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCATTCCCACCGCCGATTATCG > 1:4584026/1‑67 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCG > 1:5728646/1‑67 TCCCCTGCGCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCCCCGCCGATAATCG > 1:208572/1‑67 CCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGCTAATCGCC > 1:484369/1‑66 CCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGATAATCGCC > 1:24984656/1‑66 GCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTT > 1:12627006/1‑67 GCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTT > 1:20095305/1‑67 tcgGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:20259963/4‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:17200288/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:10772038/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:17503721/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:24436719/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:13673492/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAACCGCCGCTTCCC > 1:12734858/1‑68 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:3144881/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:4673498/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:14617925/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:3417371/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:23357033/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:8824421/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:21141165/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC < 1:16543766/66‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCCCCGCCGATAATCGCCGCTTCCCGTTT > 1:12247465/1‑67 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:6063461/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:23128547/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:735913/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:27706483/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:20578459/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:3650848/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTCGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:14830552/67‑1 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < CP009273/2436093‑2436030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |