| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3202572 | 250 (0.690) | 13 (0.040) | 7/92 | NT | 7.3% | coding (1190/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | CP009273 | = 3202615 | 127 (0.430) | coding (1233/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:11242538/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:9346894/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:7859878/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:5997238/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:5120103/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:3731784/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28361932/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:2194311/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:21783274/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:20758842/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:17553368/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:15142624/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:1138787/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:11424629/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTCATTGTGGTGTTTTATATACTGCGCTACATATTC > 1:28130671/1‑67CGGTTATTCGCCAACGATGGTGATCGTGGCGTTGATTGTGGTGTTTTATCTACTGCCCTACTTTTTC > 1:3196240/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:26751635/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG < 1:23055095/67‑1 TTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCA > 1:8152123/1‑68 atgCGCCAACGATCGTGATGGTGGCGTTGATTGTGGCGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:22979739/65‑1 ATTCGCCAACGCGGGTGAGGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:18373967/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:11730415/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:23508071/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:8304127/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:26036682/68‑1 TCGCCACCGATTGGGATGTTGGCGGTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCGGCGC < 1:24380449/68‑1 ATCTACTGCGCTACTTTTTCGCCAGCGCAGCTGCAATCATCTTCGGTGCGAGAGCGGTGGTATCCGCC > 1:5076469/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCGTCGGTGCGAGAGCGGAGGTATACGCCGT > 1:13216898/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:12209459/1‑68 ACTGCGCTACTTTTTCGCCAGCGCCGCAGCAATCATCATCGGTGGGAGAGCGGAGGTATACGCCGTG > 1:20238377/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCCGCAATCATCTTCGGAGCGTGCGCGGAGGTATACGCCGTGG > 1:28178933/1‑68 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATGATCGGTGCGAGCGCGGAGGTATACGCCGTG > 1:5760965/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:14203596/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:26162117/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:26038134/1‑67 TGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGCGCGGAGGTTTACGCCGTGGC > 1:7164559/1‑67 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGC > 1:10855721/1‑68 CGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGGGCGAGCGCGGTGGTATACGCCGTGGg > 1:24829308/1‑64 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTG > 1:7364618/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:2412048/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:14402250/1‑68 GCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:6017346/1‑68 CCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTA > 1:25171956/1‑67 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:15310701/68‑1 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGCCGAAAAAGTAGC > 1:2601497/1‑68 GCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC > 1:5548674/1‑68 CGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCG < 1:19733241/55‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGGAAAAGTAGCGCAG > 1:7388946/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:13514928/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:13752297/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:20337405/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:23300868/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:24003893/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:15606693/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCA < 1:26486274/67‑1 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGCTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:22148314/1‑68 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |