| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4061067 = | 375 (1.040) | 26 (0.090) | 10/94 | NT | 8.9% | coding (1570/2037 nt) | yihQ | alpha‑glucosidase |
| ? | CP009273 | 4061094 = | 215 (0.710) | coding (1543/2037 nt) | yihQ | alpha‑glucosidase | |||||
Only 100 of 204 total aligned reads displayed.
GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:27137339/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:26392803/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:25872968/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:29297149/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:29545357/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:7903417/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:6491297/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:3185928/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:624161/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:22626296/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:4730457/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:21259366/68‑1 CCTGCACCACAGCGACATTGGCGGTTACACCCCCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:14954209/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCATAGAGCTGCT > 1:21916812/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:20148788/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:9716420/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:5427326/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:1954031/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:597/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:22153026/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:4316839/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:3040292/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:17946938/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:670341/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:1704351/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:16018973/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:1573680/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:15172088/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:7074402/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:14302629/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:13175062/1‑66 CTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCT < 1:15585014/68‑1 CTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGC < 1:24974948/67‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGCGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:27078193/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:24768006/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:22447167/68‑1 CACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:122916/1‑67 ACCACCGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:28528434/1‑66 ACCACAGCGACATTGGCGGTTCCACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:6805555/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGC < 1:26621047/68‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGC < 1:7336639/68‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:27201848/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:4478470/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:1343396/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:111732/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:6853967/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:1256645/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:22893002/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:12526281/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:14645085/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:15333593/1‑66 CCACAGCGACATTGGCGGTTACACCCCCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:14155824/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:8704207/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:27674875/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:11989396/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:2149538/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGATGCTGCTGC > 1:21410584/1‑65 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:8431529/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:23721817/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:19145661/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGAAGAAGCCCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:12728357/65‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:8046450/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:24664668/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:4507517/68‑1 TTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAAC < 1:19739878/68‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:2738147/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:20301546/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:1444947/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:13019906/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:11431640/67‑1 TACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGG < 1:16670444/67‑1 TACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGG < 1:19909386/67‑1 CCCTGTTTGAGATGAAGCCCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCG < 1:11931575/68‑1 CCCTGTTTGAGATCAACCGCCGCAAAGAGCTGCTGCGGCGCTTCAGCTCAAACAGGGTGGTGTAACCG < 1:29071539/68‑1 TGACGCGCACCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCT < 1:17359120/67‑1 TGCTGCCCTTCAGCGCAAACTGGGGGGTGTAACCGCCAATGGCGCTGTGGTGCAGGCCATGTCCGGT < 1:5801542/67‑1 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:11590920/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:17846854/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:18583730/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:19028205/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:11736582/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTACAGGCCATGTCCGGTCA > 1:18819548/1‑68 CTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCAT > 1:25803624/1‑68 CTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCAT > 1:20438390/1‑68 gGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:25724647/67‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:10555011/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:8078460/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:6338942/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:2416156/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:3762755/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:2517587/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:29600600/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:29344150/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:28023584/68‑1 GCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:25307419/1‑67 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:6643865/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:6715904/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:7122855/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:10004880/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:2861874/67‑1 GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |