| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4306574 = | 148 (0.410) | 10 (0.030) | 7/98 | NT | 7.4% | coding (462/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | CP009273 | 4306632 = | 122 (0.390) | coding (404/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4306646‑4306574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306632‑4306698 GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGC > 1:3291916/1‑68 CCGTCTGCATCTGCGCTGCGAAGTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:20088958/68‑1 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:12681953/68‑1 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:5932901/68‑1 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:5431182/68‑1 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:25828883/68‑1 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:22736933/68‑1 GTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC > 1:26034760/1‑68 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGA < 1:7051428/68‑1 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGA < 1:28302207/68‑1 TCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCA > 1:24639922/1‑68 TGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGT > 1:7450009/1‑67 TGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGT > 1:2661324/1‑67 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:25462410/1‑68 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:8171254/1‑68 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:25496929/1‑68 GCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTT > 1:12147659/1‑68 GCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTT > 1:20211923/1‑65 GCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCG > 1:10956939/1‑68 ACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATG > 1:26421900/1‑67 tgGCAGCGCAGATGCTGTCGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTGTTGGATGGC < 1:26517370/63‑1 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:13148796/1‑68 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:28156897/1‑68 AGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATC > 1:14164512/1‑68 AGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGAT < 1:19707918/67‑1 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:24493489/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:25911841/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:14339295/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:14622317/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:29370760/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:3274481/1‑68 GCAGATGCAGCCGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:25720554/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT < 1:10246895/67‑1 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:22672290/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:7187802/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:1456176/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:17763909/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:186176/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:18918578/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:25619593/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:19463671/1‑66 GCAGATGCAGACGGTGCTAGGCGCGGTTGACGCCGCGGTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:20616935/1‑66 CAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > 1:5336967/1‑68 GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4306646‑4306574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306632‑4306698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |