New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4506708 =	290 (0.810)	20 (0.070)	11/94	NT	8.4%	coding (827/954 nt)	fecR	FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator
	?	CP009273	4506742 =	191 (0.630)					coding (793/954 nt)	fecR	FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator

TAAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4506782‑4506708 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  >  CP009273/4506742‑4506807                                                                                                                                               TAAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCC                                                                            <  1:18414151/67‑1  AAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGC                                                                          <  1:4572081/68‑1  AAACCGCTGGGGGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGC                                                                          <  1:6906527/68‑1   AACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCC                                                                         <  1:7713528/68‑1   AACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCC                                                                         <  1:13607747/68‑1   AACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCC                                                                         <  1:19338068/68‑1    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:1753119/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:29496069/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:26772524/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:820656/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:16039454/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:18773627/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:26167290/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:14706849/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:6324896/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:6602460/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:6606191/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:714433/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:7387193/1‑68    ACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCG                                                                        >  1:21013452/1‑68     CCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGT                                                                       <  1:20979390/68‑1      cgtTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:20460773/65‑1      CGCTGGGTGAGGTGATAGCCACTCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:9446860/68‑1      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:17571487/1‑68      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:639188/68‑1      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:26661015/68‑1      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:8641051/68‑1      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:19394410/68‑1      CGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACCGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:6129607/68‑1      CGCTGGGGGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:4913509/68‑1      CGCGGGGTGAGGTGATAGCCACGCTAACCCGATACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      <  1:13927544/68‑1       GCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:18734279/1‑67       GCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:5652570/1‑67       GCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:18577713/1‑67       GCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:23043548/1‑67       GCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTT                                                                      >  1:1171568/1‑67         gGGGGGAGGTGATAGCCACGCTAACCCGTTACCGCACCGGCGGGCTGCGCTGCGATCCCGCCGTTGC                                                                    <  1:19262318/66‑1         TGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGC                                                                    <  1:28886897/67‑1         TGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGC                                                                    <  1:3109837/67‑1         TGGGGGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCG                                                                   <  1:7675124/68‑1          GGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGG                                                                  <  1:12549995/68‑1            GTGAGGTGATAGCCACGCTAACCCGTTACCACAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGT                                                                 <  1:13265726/67‑1                GGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGGGATCCCGCCGTTGCGGTAACG                                                             <  1:1710944/67‑1                  TGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGG                                                            <  1:6377559/66‑1                  TGATAGCCACGCTAACCCGTTACCGCAACGGCGGGCTGCGCTGCGAGCCCGCCGTTGCGGTAACGG                                                            <  1:9170893/66‑1                     tcGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAG                                                       <  1:22187439/66‑1                     aAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAG                                                       <  1:269192/67‑1                     TAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAG                                                       <  1:8989642/68‑1                      acCCACGCAAACCCGTTCCCGCAACGGCGGGCTGCGCGGCGATCCCGCCGTTGCGGTAACGGGTTAGC                                                      <  1:20175464/66‑1                      AGCCACGCTAACCCGTTACCGCACCGGCGTGCTGCGCTGCGAGCCCGCCGTTGCGGTAACGGGTTAGC                                                      <  1:4886575/68‑1                         CACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAGCG                                                     <  1:25956392/66‑1                          ACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAGCGTGG                                                  <  1:14996811/68‑1                           CGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAGCGTGGC                                                 <  1:2117929/68‑1                           CGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGACCCCGCCGTTGCGGTAACGGGTTAGCGTGGC                                                 <  1:25589558/68‑1                           CGCTAACCCGCAACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCGGTAACGGGTTAGCGTGGC                                                 <  1:20575387/68‑1                           CGCTAACCCCTGACCGCAACGGCGCGCAGCGCTGCGATCCCGCCGGTGCGGTAACGGGTTAGCGTGGC                                                 <  1:2415899/68‑1                                              CGGCGTGCGGCGCGGCCAACCCGCCGTGGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGT                              <  1:12151223/68‑1                                              CGGCGGGCGGCGCTGCGATCCCCCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGT                              <  1:104381/68‑1                                                      TGCGCGGCCAACCCGCCGTGGCGGTAACGGGTTAGCGTGGCTATCACCGCACCCAGCGGTTTATCGC                       <  1:23639367/67‑1                                                           gcCGACCCCGCCGTTGCGTTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAG                  <  1:10964026/65‑1                                                           gGCGATCGCGCCGTTGCGGAACCGGGTAAGGGTGGCAATCACCTCACCCAGCGGTTTATCGCTGAAG                  <  1:6470960/66‑1                                                           TGCGATCCCGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGC                 <  1:18813367/68‑1                                                                cCCCGCCGTTCCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGG            <  1:6376791/67‑1                                                                 CCCCCCGTGGCGGTAACGGGTTAGCGGGGCAAGCACCGCACCCAGCGGTTTATCGCTGAAGCTCAGGA           <  1:15148922/68‑1                                                                 CCCCCCGTCGCGGAAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGA           <  1:17803634/68‑1                                                                    GCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGT        <  1:6327355/68‑1                                                                    GCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGT        <  1:16155735/68‑1                                                                     CCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGT        >  1:24530420/1‑67                                                                     CCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGT        >  1:3144075/1‑67                                                                     CCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGT        >  1:12545994/1‑67                                                                      CGTTGCGGTAACGGTTTAGCGTGGCTATCACCTCACACAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:17881084/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:576551/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:22289275/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:10988230/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:6641084/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:8382810/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:8219755/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:17114861/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:16546298/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:3499059/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:622849/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:1541557/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:5776261/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:8859105/68‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTC       <  1:24437682/67‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTC       <  1:377243/67‑1                                                                      CGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTC       <  1:2435919/67‑1                                                                      CGTTGCGGAAACGGGTTAGCGGGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCC      <  1:4550929/68‑1                                                                         TGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTT    <  1:15320926/67‑1                                                                          GCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  <  1:27962818/68‑1                                                                          GCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  <  1:2729929/68‑1                                                                          GCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  <  1:14749550/68‑1                                                                          GCGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  >  1:1047268/1‑68                                                                          GCGGAAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  <  1:11723304/68‑1                                                                                                                                               TAAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4506782‑4506708 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgttgcGGTAACGGGTTAGCGTGGCTATCACCTCACCCAGCGGTTTATCGCTGAAGCTCAGGATGTCCTTCG  >  CP009273/4506742‑4506807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.