| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4506708 = | 290 (0.810) | 20 (0.070) | 11/94 | NT | 8.4% | coding (827/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | CP009273 | 4506742 = | 191 (0.630) | coding (793/954 nt) | fecR | FecI pro‑sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
Only 100 of 374 total aligned reads displayed.
TTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506641‑4506774 | cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc < 1:2729929‑M1/2‑1 (MQ=255) cgaaggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGc < 1:14749550‑M1/2‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgtgtgaggtgatagccacgctaaaccgttaccGCAAcg < 1:17881084‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:8219755‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:22289275‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:622849‑M1/6‑1 (MQ=255) ggacatcctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGCAAcg < 1:1541557‑M1/6‑1 (MQ=255) gATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcgg < 1:16882067/68‑1 (MQ=255) tAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcg < 1:10157519/68‑1 (MQ=255) tAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcg < 1:19356254/68‑1 (MQ=255) tAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcg < 1:29376891/68‑1 (MQ=255) tAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAAcggcg < 1:6640694/68‑1 (MQ=255) tcctgagcttcagcgataaaccgctgggtgcggtgcttgccccgctaacccgttaccGCCACgggggg < 1:15148922‑M1/11‑1 (MQ=255) aCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCggg > 1:3655116/1‑68 (MQ=255) aCGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCggg < 1:14327100/68‑1 (MQ=255) cctgagcttcagcgataaaccgctgggtgaggtgatagccacgctaacccgttaccGGAACGGcgggg < 1:6376791‑M1/12‑2 (MQ=255) gTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGa > 1:4484779/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCACCGGCGGGATc > 1:10000080/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:13880000/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:14177967/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc > 1:27888080/1‑67 (MQ=255) tCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATc < 1:5286809/67‑1 (MQ=255) tCAGGATCGCATCGGTATATTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGagc < 1:3031835/67‑3 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:15256764/1‑67 (MQ=255) ggATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca > 1:16426531/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:25256363/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:2352956/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:26579718/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:3304960/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc < 1:7086486/67‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc < 1:2841289/67‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc < 1:9743593/67‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc < 1:12946229/67‑1 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagc > 1:12031748/1‑67 (MQ=255) aTCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgca < 1:24732053/65‑1 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:16158129/68‑1 (MQ=255) cGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcgca < 1:20346370/68‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:27004313/67‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc > 1:25884294/1‑67 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:11733301/67‑1 (MQ=255) aTCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCgcagcgcagc < 1:23199474/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:29315729/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:2572216/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:7475087/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGcc < 1:16366527/67‑1 (MQ=255) tATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCCCAGCACGcc < 1:20608101/67‑1 (MQ=255) accgctgggtgaggtgatagccacgctaacccgttaccGCAACGGGGGGATCGCAGCGCCGCccgccg < 1:104381‑M1/30‑1 (MQ=255) aTTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCACCGGCGGGATCGCAGCGCAGCACGCCGt > 1:5184240/1‑68 (MQ=255) ttttCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTg < 1:10966283/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:10842742/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:17459948/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:18757525/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:15925609/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:13608066/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:22921816/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg < 1:25578246/68‑1 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:13311739/1‑68 (MQ=255) tCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCgg > 1:23657490/1‑68 (MQ=255) cgCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTa < 1:21269127/67‑1 (MQ=255) aGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATcgcagcg > 1:4689440/1‑50 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:2437122/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:4185031/67‑1 (MQ=255) gAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACgg < 1:9182477/67‑1 (MQ=255) gccacgctaacccgttaccGCACCGGCGGGATCGCAGCGCTGCGCGCCGTTGCGGTCAGGGGTTAGCg < 1:2415899‑M1/49‑1 (MQ=255) cccGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCCCGCCGTTGCGGTAACGGGTTAGCg > 1:16604548/1‑68 (MQ=255) ccacgctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGt < 1:14996811‑M1/50‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:8502449/68‑1 (MQ=255) gCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTgg < 1:7942394/68‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCTCGCCGGTGCGGGAACGGGTTAGCGTGGCt > 1:4866896/1‑68 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCCCGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:27973857/1‑68 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:6906017/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:13162668/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:27458114/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:6519026/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:21649313/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:12161179/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGc < 1:5699882/67‑1 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:11551851/1‑68 (MQ=255) tCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCt > 1:22009027/1‑68 (MQ=255) gctaacccgttaccGCAACGGCGGGATCGCCGCGCAGCCCGCCGTTGCGGGAACGGGTTTGCgtgggt < 1:20175464‑M1/54‑3 (MQ=255) ctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGctt < 1:269192‑M1/55‑2 (MQ=255) ctaacccgttaccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTa < 1:8989642‑M1/55‑1 (MQ=255) cAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTa > 1:5770704/1‑68 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCGGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:26215754/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:25026870/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:5436919/1‑67 (MQ=255) cgcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtc < 1:18909504/66‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:4369277/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:15572104/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcac < 1:29672444/67‑1 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:6118792/1‑66 (MQ=255) gcAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtca > 1:12374457/1‑66 (MQ=255) cgttaccGCAACGGCGGGATCCCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacc < 1:1710944‑M1/60‑1 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:20878467/1‑67 (MQ=255) cccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctca > 1:18672225/1‑67 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:23885717/67‑1 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:28801068/67‑1 (MQ=255) ccGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTAtcacctcac < 1:1836044/67‑1 (MQ=255) ccGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCAccc < 1:12549995‑M1/66‑1 (MQ=255) cGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCCCCCa < 1:7675124‑M1/67‑1 (MQ=255) | TTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGGGATCGCAGCGCAGCACGCCGTTGCGGTAACGGGTTAGCGTGGCTATCACCTCACCCA > CP009273/4506641‑4506774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |