| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4514659 = | 391 (1.090) | 3 (0.010) | 3/98 | NT | 0.96% | coding (169/906 nt) | yjhH | putative lyase/synthase |
| ? | CP009273 | 4514711 = | 276 (0.880) | coding (117/906 nt) | yjhH | putative lyase/synthase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4514730‑4514659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcccGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > CP009273/4514711‑4514776 TGATTAATAACGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACA < 1:9017225/68‑1TGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACA < 1:6519891/68‑1TGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACA < 1:14932249/68‑1 GATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG < 1:1162785/68‑1 ATTAATAATGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:4211972/68‑1 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:22537892/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:23283607/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:26089598/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:26585734/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:15356836/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:26981612/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:4078664/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:22381070/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:21504118/1‑67 ATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:9355271/1‑67 TTACTAAAGGGGGCGACGGGCGGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:4328597/67‑1 TTAATAACGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:26470713/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:17876926/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:22317484/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:22293007/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:20008458/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:20201340/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:17535234/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:13620889/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:4623990/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:646878/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:11736978/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:8617937/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:10575396/67‑1 TTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAACGAATACAGC < 1:20615996/67‑1 TTAATAAAGGGGTCGAAGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGC < 1:23458306/67‑1 TAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCC > 1:13278519/1‑68 GGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAG > 1:25561297/1‑58 ATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCCGTCGACCCCTTTATTAATCAGGAAG > 1:29419850/1‑67 GGTGGTGAATTTAGCCAAATGAATACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTC > 1:22066047/1‑67 TGGTGAATTTAGCCAAATGAATACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGC > 1:26813564/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT < 1:25412634/68‑1 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:3847701/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:16872688/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:26813656/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:2698201/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:27199371/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:27230813/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:29783176/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:27091203/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:3851566/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:4103216/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:773659/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:10973867/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:9218681/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:9446828/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:9808342/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:2425737/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:1979761/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:21329518/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:19301316/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:19229948/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:17914800/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:17443762/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:22566163/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:226814/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:24289792/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:23440548/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGT > 1:10286539/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAACGGT > 1:3861830/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTGTTTATCAAGGGT > 1:21578001/1‑67 ACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGAAACTTCGCGCATTGCCATTATATCAAGGGT > 1:22405575/1‑67 CAGCCCGTCGCCCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:26161023/1‑67 CAGCCCGTCGCCCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:27012629/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:13449935/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:11817923/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:12088822/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:4913841/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:4822803/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:16905152/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:9040476/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:4555086/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:17168462/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:21741200/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:2653004/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:22075287/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:7941476/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:10592212/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:20707137/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:29545248/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:15537282/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:27797199/1‑67 CAGCCCGTCGACCCCTTTATTAATCAGGAAGTCCGCAACTTCGCGCATTGCCTTTTTATCAAGGGTT > 1:7877050/1‑67 GCCAGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCG > 1:27216758/1‑68 CCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCG > 1:23459588/1‑67 CCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCG > 1:4497508/1‑67 CCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCG > 1:4707442/1‑67 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > 1:12197549/1‑68 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > 1:14623602/1‑68 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > 1:18813750/1‑68 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > 1:14877812/1‑68 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGT < 1:6791983/67‑1 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTC < 1:11607121/64‑1 CCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTGCGCGCATTGCCTTTTTATCAAGGGTGCC < 1:20325710/65‑1 TGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4514730‑4514659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcccGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTC > CP009273/4514711‑4514776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |