| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 282 (0.780) | 21 (0.070) | 8/94 | NT | 7.3% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 293 (0.970) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 589 total aligned reads displayed.
AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAT > CP009273/64490‑64624 | aGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:18881817‑M1/68‑1 (MQ=255)aGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:6254140‑M1/68‑1 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:10770648/1‑68 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:26814775/1‑68 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:3337151/1‑68 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATACTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:10188602/1‑68 (MQ=255) gCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTg > 1:28436802/1‑68 (MQ=255) ggATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGa < 1:14709200/67‑1 (MQ=255) tgatCGCCGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATcc > 1:20449733/1‑68 (MQ=255) tgatCGACGGGTACAGGCTTTTATAGTCCAGCACCTGCACTGAATCATAAAGCCCTGGCCGTGAATcc < 1:8368864/68‑1 (MQ=255) tgatCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATcc < 1:12046501/68‑1 (MQ=255) tgatCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATcc < 1:19089849/68‑1 (MQ=255) tgatCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATcc > 1:16722854/1‑68 (MQ=255) tCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCAt < 1:23487416/67‑1 (MQ=255) tCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCAt < 1:2198538/67‑1 (MQ=255) ggTACAGGCTTTTATAGTCCAGCACCAGCCCTGAATCATAAAGCCCTGGCggctacgtgatggattc > 1:7351990‑M1/1‑50 (MQ=255) ggTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTa > 1:17178320/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc < 1:15534687/67‑1 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:26139316‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:363027‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:22732919‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgc > 1:26279236‑M2/1‑62 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccaggg > 1:27732746‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:24429757‑M2/1‑61 (MQ=255) ttttATAGGCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:13041024‑M2/1‑61 (MQ=255) ttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggct > 1:1837150‑M2/1‑59 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggcttt > 1:15824790‑M2/1‑57 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:20264565/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:24208678/1‑67 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttat > 1:27012813‑M2/1‑55 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:9406124/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:23220358/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt < 1:19961837/66‑1 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:22149169/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTg < 1:753526/67‑1 (MQ=255) accagcacTGAATCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagt > 1:7207729‑M1/1‑27 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:25783364/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:10920199/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:11869994/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:16427957/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:20620104/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCACGGCTGGCGTgcggcg > 1:14202698/1‑67 (MQ=255) gcacTGAATCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctg > 1:21256506‑M1/1‑23 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc < 1:577116/68‑1 (MQ=255) tGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGc < 1:12610823/68‑1 (MQ=255) aTCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctgg > 1:5470149‑M1/1‑16 (MQ=255) aTCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctgg > 1:28692781‑M1/1‑16 (MQ=255) aTCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctgg > 1:2666214‑M1/1‑16 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:1366255/1‑68 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:4173827/68‑1 (MQ=255) aTAAACCCCTGGCCGGGAATCCATCACGTAGCCgccagggctttatgattcagtgctggtgctggact > 1:29090498‑M2/1‑33 (MQ=255) aacGCCCTGGCCGTGAATCCCTCCCGTACCCgccagggctttatgattcagtgctggtgctggactat > 1:25015732‑M2/1‑31 (MQ=255) aaaGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggacttt > 1:3849391‑M1/1‑11 (MQ=255) aaaGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactat > 1:17684060‑M1/1‑11 (MQ=255) aaaGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactat > 1:24720587‑M1/1‑11 (MQ=255) aaaGCCCTGGCCGTGAATCCATCCCGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:15042339/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:26018030/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:1478221/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:28935176/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:17932084/1‑68 (MQ=255) gCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaa > 1:11373235‑M1/1‑8 (MQ=255) gCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaa > 1:14000664‑M1/1‑8 (MQ=255) gCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaa > 1:14999521‑M1/1‑8 (MQ=255) gCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaa > 1:23924440‑M1/1‑8 (MQ=255) gCCCTGGCCGTGAATCGATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:18102176/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:16136846/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:17550455/1‑68 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCGCTTCGCCGAGATTAGgc > 1:5075041/1‑67 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:16878911/1‑67 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaac > 1:4945122‑M1/1‑6 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:25540753‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:7842500‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:8070460‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:10046707‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:28207485‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:13781858‑M1/68‑63 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:8524631/1‑68 (MQ=255) cTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaagc < 1:22513340‑M1/68‑64 (MQ=255) cTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag > 1:17435857‑M1/1‑5 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:9063999/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:1916448/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:18571166/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:11679053/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:9656355/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:19632424/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:25356675/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:6593921/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:21728709/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:12747944/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:3168083/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:15296950/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:23655279/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:26428172/68‑1 (MQ=255) gcggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag > 1:21335785‑M1/1‑2 (MQ=255) cggctacgtgatggattcccggccagggctttatgattcagtgctggtgctggactataaaagcctg < 1:9847795‑M1/67‑67 (MQ=255) cggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaagcctgt > 1:8174212‑M1/1‑1 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:29444606/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:8725764/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:13263317/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:27229716/1‑68 (MQ=255) | AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAT > CP009273/64490‑64624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |