| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 282 (0.780) | 21 (0.070) | 8/94 | NT | 7.3% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 293 (0.970) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 457 total aligned reads displayed.
ACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTCGC > CP009273/64511‑64644 | aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc > 1:26516818/1‑67 (MQ=255) cAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGGGAATCCATCACGTAGCCg < 1:9847795‑M2/67‑2 (MQ=255) gCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccag < 1:27153360‑M2/68‑6 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:10046707‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:26139316‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:7348013‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:7842500‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:834585‑M2/68‑7 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:14712701‑M2/1‑61 (MQ=255) ttttATAGGCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:13041024‑M2/1‑61 (MQ=255) tttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggc > 1:23884571‑M2/1‑60 (MQ=255) tttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggc > 1:14000664‑M2/1‑60 (MQ=255) tttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggc > 1:11373235‑M2/1‑60 (MQ=255) ttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggct > 1:1837150‑M2/1‑59 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:25228092/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:25546118/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:1946306/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCATGGCCGTGAATCCATCACGTAGCCcccatg < 1:24059709‑M2/63‑7 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:10802208/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:17867798/1‑68 (MQ=255) tCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt > 1:3112450/1‑67 (MQ=255) tCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt > 1:19125551/1‑67 (MQ=255) tCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt > 1:9150369/1‑67 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgat > 1:28692781‑M2/1‑52 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt < 1:2089279/66‑1 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:22149169/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:11867558/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:13923154/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:6299281/1‑68 (MQ=255) cagcaccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcg < 1:11964230/68‑1 (MQ=255) cagcaccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcg < 1:18680865/68‑1 (MQ=255) agcaccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcg > 1:8496124/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCGGTGAATCCATCACGTAGCCGCCATGGCTGGCGTgcggcg > 1:1847194/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:5868591/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:3865903/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:10920199/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:5420808/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:20315878/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGcggcgg > 1:26034850/1‑68 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCACGGCTGGCGTgcggcg > 1:14202698/1‑67 (MQ=255) ccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgattcagtg > 1:24576897‑M2/1‑46 (MQ=255) cacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACt > 1:502436/1‑67 (MQ=255) cacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACt > 1:23112493/1‑67 (MQ=255) acTGAATCATACAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc < 1:1613410/68‑1 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc > 1:17508070/1‑68 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc > 1:7714596/1‑68 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc < 1:2812490/68‑1 (MQ=255) cTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCg < 1:15799001/68‑1 (MQ=255) tGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGc < 1:12610823/68‑1 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:21217916/1‑68 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:1366255/1‑68 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:18138665/1‑68 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:19757161/1‑68 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:9556020/68‑1 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:4173827/68‑1 (MQ=255) aTAAACCCCTGGCCGGGAATCCATCACGTAGCCgccagggctttatgattcagtgctggtgctggact > 1:29090498‑M2/1‑33 (MQ=255) aaaGCCCTGGCCGTGAATCCATCCCGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:15042339/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGCGATTa > 1:14859543/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:22670361/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:28885147/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:6651068/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:878892/1‑68 (MQ=255) aaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAg < 1:25941418/68‑1 (MQ=255) aGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAgg < 1:4811609/68‑1 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:8114829/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:10427993/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:24847223/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:17156447/1‑68 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:16878911/1‑67 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:13312866/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:8714382/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:15494049/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:21314306/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:23512426/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCCGCGGCACTTCGCCGAGATTAGgcg > 1:2543772/1‑67 (MQ=255) ccTGGCCGTGAATCAATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:3667356/1‑68 (MQ=255) cTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGcgcg < 1:27420746/68‑1 (MQ=255) cTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGcgcg < 1:21935678/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:21728709/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:15208787/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:5683061/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:9656355/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:12747944/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:11679053/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:16414363/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:22946587/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:29507419/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTGCGCCGAGATTAGGCGCGa < 1:28364784/68‑1 (MQ=255) ccGTGATTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGCTTAGGCGCGACAt > 1:24368687/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:7424967/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:17566288/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:3241760/1‑68 (MQ=255) gTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATaa < 1:18996574/68‑1 (MQ=255) aaTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:16685238/1‑68 (MQ=255) tCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAgc < 1:9326316/68‑1 (MQ=255) tCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAgc < 1:26741144/68‑1 (MQ=255) aCGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGAt > 1:20405239/1‑67 (MQ=255) gTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCa < 1:20118541/68‑1 (MQ=255) cgccAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTcgc < 1:7090302/68‑1 (MQ=255) cgccAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTcgc < 1:26335884/68‑1 (MQ=255) | ACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTCGC > CP009273/64511‑64644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |