| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 122745 = | 186 (0.520) | 7 (0.020) | 5/98 | NT | 5.9% | coding (564/1893 nt) | aceF | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 |
| ? | CP009273 | 122779 = | 60 (0.190) | coding (598/1893 nt) | aceF | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 | |||||
Only 100 of 238 total aligned reads displayed.
ACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACG > CP009273/122678‑122812 | tcacttcaacttcgtcaccgccgatatccggaacgttaacttctttcacgccagccgctggtgcaggg < 1:10363927‑M1/1‑1 (MQ=255)aCAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCg > 1:26507551/1‑68 (MQ=255) cacttcaacttcgtcaccgccgatatccggaacgttaacttctttcacgccagccgctggtgcaggg < 1:23318895‑M1/1‑1 (MQ=255) acttcaacttcgtcaccgccgatatccggaacgttaacttctttcacgccagccgctggtgcagggg > 1:22791314‑M1/66‑67 (MQ=255) aaaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCgg > 1:14134003/1‑67 (MQ=255) aaaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTAGCGGGTGAAGCAGGCGCGGCAGCTCCgg > 1:4848408/1‑67 (MQ=255) aaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGcc < 1:16535625/68‑1 (MQ=255) aaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGcc < 1:15163828/68‑1 (MQ=255) aaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGcc < 1:3335441/68‑1 (MQ=255) aaGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTAGCGGGAGAAGCAGGAGCGGCAGCTCCGGc > 1:15834611/1‑67 (MQ=38) aGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGTcc > 1:21131072/1‑67 (MQ=255) aGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGcc > 1:23240867/1‑67 (MQ=255) aGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGcc > 1:15012581/1‑67 (MQ=255) aGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCg < 1:5101302/68‑1 (MQ=255) aGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGGGCAGCACCCGCGGCAGCTCCGGcc > 1:13802215/1‑67 (MQ=21) tgtCTAGCGGCTCGCTGATTATGGTCTTCGAAGTCCCGGGTGCAGCAGGCGCGGCAGCTCCGGCCGCt > 1:4447409/1‑68 (MQ=38) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCt > 1:12090501/1‑68 (MQ=255) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCt > 1:29330740/1‑68 (MQ=255) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCt > 1:6858667/1‑68 (MQ=255) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCAGGCCGCt > 1:28521793/1‑68 (MQ=255) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCACCGGCCGCt > 1:2311170/1‑68 (MQ=255) tgtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGCCGCGGCAGCTCCGGCCGCt > 1:17774674/1‑68 (MQ=255) catctgcgtccccgccgaattccggaacgttaacttctatcacgccagccgctggtgcaggGGCCGCt > 1:13460991‑M1/62‑68 (MQ=255) caacttcgtcaccgccgatatccggaacgttaacttctttcacgccagccgctggtgcaggGGCCGCt > 1:6894878‑M1/62‑68 (MQ=255) caacttcgtcaccgccgatatccggaacgttaacttctttcacgccagccgctggtgcaggGGCCGCt > 1:6057973‑M1/62‑68 (MQ=255) gtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGc < 1:19061876/66‑1 (MQ=255) gtCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTa > 1:26748649/1‑68 (MQ=255) tCTACCGGCTCGCTGATTATGGTCTTCGAAGTAGCCGGAGAAGCACGAGCGGCAGCTCCGGCCACTaa > 1:12952094/1‑68 (MQ=21) tACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAAc < 1:9387946/68‑1 (MQ=255) tACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAAc < 1:14620319/68‑1 (MQ=255) tACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAAc < 1:10812053/68‑1 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTGGAGGGAGAAGCACGCGCGGCAGCTCCGGCCGCTAAACAg > 1:20991664/1‑68 (MQ=25) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCTGCCGCTAAACAg > 1:12798942/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAg > 1:26176968/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAg > 1:9063242/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAg > 1:1862689/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAg > 1:7514925/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAg > 1:10992158/1‑68 (MQ=255) ccGGCTCGCTGATTATGGTCTTCGAAGTAGCGGGAGCAGCAGGAGCGGCAGCTCCGGCCGCTAAACAg > 1:12362462/1‑68 (MQ=37) ggCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCGACAAAACACGa > 1:21952539/1‑68 (MQ=37) ggCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGa > 1:20633360/1‑68 (MQ=255) ggCTCGCTGATTATGGTCTACGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGa > 1:16318948/1‑68 (MQ=255) ggCTCGCAGATTATTGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGATCCGGACGCTAAACAGGa > 1:3954706/1‑68 (MQ=255) cTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGaa > 1:8275868/1‑67 (MQ=255) cTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGaa > 1:13648297/1‑67 (MQ=255) cTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGaa < 1:14747223/67‑1 (MQ=255) cTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGaa > 1:6375138/1‑67 (MQ=255) tGATTATGGTCGTCGAAGTCGCGGGTCAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCt < 1:22547317/68‑1 (MQ=255) ttATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCg > 1:27416659/1‑68 (MQ=255) tATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCg > 1:18077784/1‑67 (MQ=255) tATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCg > 1:2338924/1‑67 (MQ=255) tATGGTCTTCGAAGTCGAGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCg > 1:28026588/1‑67 (MQ=255) aTGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGc > 1:3783389/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTTAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCa > 1:2611197/1‑66 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCTGCCGCTAAACAGGAGGCCGCTCCGGCAGc > 1:13921415/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:10599016/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:4214145/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:2972654/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:27775810/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:28266664/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:25357624/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:522174/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:5556312/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:6534843/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:10270252/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:15354643/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:7802866/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:19317883/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:818225/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:16211448/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:8957272/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:1692602/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGATCCGGCAGc > 1:10143746/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTACGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:15566884/1‑68 (MQ=255) gTCTTCGAAGTCGCGGGTGAAGAAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGc > 1:14740267/1‑68 (MQ=255) aacgttaacttctttcacgccagccgctggtgcaggGGCCGCTAAACAGGAAGCCGCTCCGGCcgcg < 1:18875037‑M1/31‑1 (MQ=255) tCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGcc < 1:1729983/68‑1 (MQ=255) cGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCCCTAAACAGGAAGCAGCTCCGGCAGCGGccc < 1:21472252/68‑1 (MQ=255) aaGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGcc > 1:20143640/1‑65 (MQ=255) aGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCt > 1:5037113/1‑67 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTACACAGGAAGCAGCTCCGGCAGCGGCCGCTGCa > 1:488233/1‑67 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc < 1:27133620/66‑1 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCa > 1:13627267/1‑67 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCa < 1:9159646/67‑1 (MQ=255) gTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCg > 1:22972470/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTGAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCTTCGCCTgg > 1:21592209/1‑67 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:22375382/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:17124835/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCGGGc > 1:24339411/1‑68 (MQ=255) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCGCCTGCAGCTGAGGCTGGCGTg > 1:27342269/1‑68 (MQ=38) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCgg > 1:10485836/1‑66 (MQ=255) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTg > 1:119521/1‑68 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGa > 1:11369068/1‑68 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGa > 1:2552164/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAaagaa > 1:17386620/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAaagaa > 1:898765/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGCCGGGAaagaa > 1:2484191/1‑68 (MQ=255) tCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCGGGCGTGAAAGAAGTTa > 1:8580504/1‑68 (MQ=255) gGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAAc < 1:2384839‑M1/67‑1 (MQ=255) cGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAAc < 1:19871895/68‑1 (MQ=255) | ACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACG > CP009273/122678‑122812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |