| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 122745 = | 186 (0.520) | 7 (0.020) | 5/98 | NT | 5.9% | coding (564/1893 nt) | aceF | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 |
| ? | CP009273 | 122779 = | 60 (0.190) | coding (598/1893 nt) | aceF | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 | |||||
Only 100 of 109 total aligned reads displayed.
CGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGAC > CP009273/122712‑122846 | gttaacttctttcacgccagccgctggtgcaggggccgctgccggagctgcttcctgtttagcggccc < 1:2384839‑M2/1‑1 (MQ=255)cGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGccc < 1:6873828/68‑1 (MQ=255)cGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGccc < 1:26562849/68‑1 (MQ=255) aGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCt > 1:5037113/1‑67 (MQ=255) aGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCt > 1:21207186/1‑67 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTg > 1:16066366/1‑67 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTg > 1:10390235/1‑67 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc > 1:8250963/1‑68 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc > 1:17349141/1‑68 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc > 1:17974392/1‑68 (MQ=255) gTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc > 1:19702354/1‑68 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTACACAGGAAGCAGCTCCGGCAGCGGCCGCTGCa > 1:488233/1‑67 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGc < 1:27133620/66‑1 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCa > 1:13627267/1‑67 (MQ=255) cgcgGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCa < 1:9159646/67‑1 (MQ=255) gTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCg > 1:20004366/1‑68 (MQ=255) gTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCg > 1:2244365/1‑68 (MQ=255) gTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCg > 1:5693546/1‑68 (MQ=255) gTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCg > 1:22972470/1‑68 (MQ=255) cgccagccgctggtgcaggGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCATCAGCg < 1:12068015‑M1/46‑1 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTGAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCTTCGCCTgg > 1:21592209/1‑67 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:22375382/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:3116092/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:2895038/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:14879421/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGc > 1:17124835/1‑68 (MQ=255) cAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCGGGc > 1:24339411/1‑68 (MQ=255) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCGCCTGCAGCTGAGGCTGGCGTg > 1:27342269/1‑68 (MQ=38) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCgg > 1:10485836/1‑66 (MQ=255) gcgcGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTg > 1:119521/1‑68 (MQ=255) cgctgatgcaggggccgctgccggagctgcttcctgtttagcggccCCTGCACCAGCGGCTGGCg < 1:12068015‑M2/19‑1 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGa > 1:2552164/1‑68 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGa > 1:7007641/1‑68 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGa > 1:11369068/1‑68 (MQ=255) cgcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCAGGCGGGa > 1:3886300/1‑68 (MQ=255) gcgGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGaa > 1:12313391/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCTCCAGGGGCTGGCGTGAtagca > 1:25846760/1‑66 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAaagaa > 1:17386620/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAaagaa > 1:12902750/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAaagaa > 1:898765/1‑68 (MQ=255) cAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGCCGGGAaagaa > 1:2484191/1‑68 (MQ=255) tCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTa > 1:23274541/1‑68 (MQ=255) tCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTa > 1:10278921/1‑68 (MQ=255) tCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCGGGCGTGAAAGAAGTTa > 1:8580504/1‑68 (MQ=255) cGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAAc < 1:19871895/68‑1 (MQ=255) GGCAGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACg < 1:9017587‑M1/68‑1 (MQ=255) GCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGt < 1:13702422‑M1/68‑1 (MQ=255) GCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGt < 1:907222‑M1/68‑1 (MQ=255) ccgctgccggagcggctgcctgtttcccggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGt < 1:11737291‑M2/35‑1 (MQ=255) CCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGt < 1:15319840‑M1/67‑1 (MQ=255) CCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGt < 1:20219533‑M1/67‑1 (MQ=255) CCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCGGGCGTGAAAGAAGTTAACGt < 1:6401697‑M1/67‑1 (MQ=255) tAATCAGGAAGCAGCTGCGGCCGCGGCACCTGCACCAGCGGCTGGCGTTAAAGAAGTTAACGTTCCgg < 1:28655480/68‑1 (MQ=255) aCAGGAAGCAGCTCCGGCAGCGGCTCGGGGTCCAGGGCCTGGCGTGAAAGCATGTAACGTTCGGGata > 1:28885510/1‑68 (MQ=255) aCAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGata > 1:24187688/1‑68 (MQ=255) aCAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGata < 1:16475273/68‑1 (MQ=255) aCAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGata > 1:15672172/1‑68 (MQ=255) aCAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGata > 1:8740848/1‑68 (MQ=255) aGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATc > 1:28691418/1‑68 (MQ=255) aaGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAAGGTTCAGGATTTcggc > 1:2105252/1‑68 (MQ=39) aaGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggc > 1:25194018/1‑68 (MQ=255) aaGCAGCTCCGGCAGCGGCCCCTGAACCAGCGGCTGGCGTGAAAGAAGTTAACGTACCGGATATcggc > 1:5503823/1‑68 (MQ=39) tgcctcctgtttagcggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggc < 1:10839887‑M2/48‑1 (MQ=255) gcagcTCCGGCAGCTGCCCCTGCACCAGCGGCTGGCGTGAAAGATGTTAAAGTTCCGGATATcggcgg > 1:20260805/1‑68 (MQ=38) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggcgg > 1:15186495/1‑68 (MQ=255) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggcgg > 1:8175210/1‑68 (MQ=255) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggcgg > 1:23541137/1‑68 (MQ=255) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggcgg > 1:13783198/1‑68 (MQ=255) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggcgg > 1:13751734/1‑68 (MQ=255) gcagcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATcggca > 1:28160778/1‑66 (MQ=255) gcagcTCCGGCAGCGGCAGCTGCAGGTGGCGCTGGCTTGAAAGCATTTAAGGTTGAGGAGTTcggcgg > 1:23253833/1‑68 (MQ=255) agcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGt < 1:19026080/67‑1 (MQ=255) gcTCCGGCAGCGGCCCCTGCCCCAGCGGCTGGCGGGAAAGAAGTTACCGTGCCGGATATCGGCGGTg > 1:11086084/1‑67 (MQ=255) gcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTg > 1:19158749/1‑67 (MQ=255) gcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTg > 1:10862633/1‑67 (MQ=255) gcTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGGGAAAGAAGTTTACGTTCCGGATTACGGCGGTg > 1:21279025/1‑67 (MQ=255) gactgttcagcggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTg > 1:29348906‑M2/16‑67 (MQ=255) gactgttcagcggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTg > 1:3000432‑M2/16‑67 (MQ=255) tCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGa < 1:24371724/66‑1 (MQ=255) tCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGa < 1:18718708/66‑1 (MQ=255) ccGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGa > 1:4041249/1‑68 (MQ=255) cGGCAGCTGCCCCTGCACCAGCGGCTGGCGGTAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGaa < 1:13269416/68‑1 (MQ=37) cGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTTCGGATATCGGCGGTGACGaa < 1:22283221/68‑1 (MQ=255) cGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGaa < 1:20813911/68‑1 (MQ=255) cGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGaa < 1:11171690/68‑1 (MQ=255) cAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGtt > 1:6417408/1‑68 (MQ=255) cAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGtt > 1:10678541/1‑68 (MQ=255) cAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGtt > 1:7416777/1‑68 (MQ=255) agcggccCCTGCACCAGCGGCTGGCGTGATAGAAGTTAACGTTCCGGAATTCGGCGGGGACGCAGATg > 1:13460991‑M2/8‑68 (MQ=255) agcggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTg > 1:6894878‑M2/8‑68 (MQ=255) agcggccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTg > 1:6057973‑M2/8‑68 (MQ=255) ggccCCTGCACCAGCTGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGa < 1:27991076‑M2/62‑1 (MQ=255) ccCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGt > 1:22791314‑M2/3‑67 (MQ=255) cCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTg < 1:23710033‑M2/66‑1 (MQ=255) cCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTg < 1:23318895‑M2/66‑1 (MQ=255) cCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTg < 1:9063463‑M2/66‑1 (MQ=255) cCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGa < 1:4041909‑M2/67‑1 (MQ=255) cCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGa < 1:10363927‑M2/67‑1 (MQ=255) ccTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGAc < 1:11116150/68‑1 (MQ=255) ccTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGAc < 1:29235506/68‑1 (MQ=255) | CGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGAC > CP009273/122712‑122846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |