| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 164 (0.460) | 13 (0.040) | 7/90 | NT | 7.1% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 210 (0.730) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 582 total aligned reads displayed.
ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 | acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:20809925‑M1/1‑68 (MQ=255)acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCGGTCACTATCGGATGCCGAAAGCCATTGCTGC > 1:21322954‑M1/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:16165478/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:15722345/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:10685178/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:14537832/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:28275341/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:13702086/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:27131249/68‑1 (MQ=255) cTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGtt < 1:23431813/68‑1 (MQ=255) gCTTATACGTGTATCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:24999724/68‑1 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:4449204/1‑68 (MQ=255) ttATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCca < 1:24221849/68‑1 (MQ=255) tataCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCcac < 1:8954150/68‑1 (MQ=255) ataCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCcaca < 1:19692540/68‑1 (MQ=255) taCGTGTAGCCGGGCAGACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:6247891/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:21815026/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:18015190/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:11562733/68‑1 (MQ=255) aCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:766431/1‑67 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGCCGAAAGCCATTGCTGCGTTCCCACATgc < 1:28991732‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:28539924‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:2306321‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:26517921‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:18739689‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:9692257‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:22582614‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:28937273‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17699711‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10340314‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7153918‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:4045973‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17105845‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCAATGCTGCGTTCCCACATgc < 1:18381387‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAAAGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:6621009‑M2/68‑3 (MQ=255) cGTGTAGACGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGATGCGTTCCCACATgc < 1:19256812‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTAACCGCTGTCACGATCGGATGACGAAAGCCATAGCTGCGTTCCCACATgca > 1:1511054‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:23630448‑M2/68‑4 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:26901725‑M2/68‑4 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:6969109‑M2/1‑65 (MQ=255) tgtAGCCGGGCAAACTAAACGCTTTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:8311131‑M2/67‑4 (MQ=255) tgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:19020931‑M2/67‑4 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:5050265‑M2/1‑63 (MQ=255) ctaGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:5124057‑M2/2‑63 (MQ=255) aGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCatgtgggaacgcagcaa < 1:7867209‑M1/68‑18 (MQ=255) aGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaa < 1:4968941‑M2/68‑8 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:25966433‑M2/68‑9 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:9374476‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:21026259‑M2/67‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:15612160‑M2/67‑10 (MQ=255) gCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcg > 1:20322857/1‑67 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAATCTATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg < 1:20446570/68‑1 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACACGCAGCAATGGCGGCACTg < 1:17538124/68‑1 (MQ=255) cGCTGTCACGATCGGATGTCGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa < 1:28831703/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:1202500/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:1019142/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:29812946/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:16645654/1‑67 (MQ=255) gATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTgg > 1:21941227/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagc > 1:29351254‑M1/1‑24 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGGACTGACGGAACTTCTTGGGc > 1:28089373/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:14956356/67‑1 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:4796310/68‑1 (MQ=255) gACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaag > 1:17384011/1‑68 (MQ=255) gAAAGCCATTGCTGCGTTCCCTCATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCATAaagaag < 1:6104519/68‑1 (MQ=255) aaaGCCATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgccagcgtttagttt > 1:13478568‑M1/1‑14 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:5359028/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:13880275/1‑68 (MQ=255) cATTGCTGCttgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:83036‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:11364214‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:18591964‑M1/1‑9 (MQ=255) cATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACa > 1:3601142/1‑68 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:18088473‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:1597531‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:652645‑M1/68‑61 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTTGTCAAAAAGAAGAGAACAGt < 1:14680033/68‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:8717361/68‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:26164724/68‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:11831524/68‑1 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:23014232‑M1/1‑5 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:24113585/1‑68 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:12679816‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:27795460‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:12190820‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:22312443‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac > 1:5792365‑M1/1‑3 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTgcc > 1:25383207/1‑66 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:7457642/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:27436877/1‑68 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:14037197‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21279806‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:13224329‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21629392‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:12618934‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:21663248‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:26693952‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:2569907‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:24677500‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgccaggctacacg < 1:16817071‑M1/68‑67 (MQ=255) gcaggtgggaacgcagcaatggctttcggcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:10010445‑M1/68‑67 (MQ=255) | ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |