| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 164 (0.460) | 13 (0.040) | 7/90 | NT | 7.1% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 210 (0.730) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 455 total aligned reads displayed.
TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 | taCGTGTAGCCGGGCAGACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:6247891/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:22339595/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:1664341/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:14941125/68‑1 (MQ=255) cGTGTAGCCGGGCAAACTAACCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:11921290‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGCCGAAAGCCATTGCTGCGTTCCCACCTgc < 1:10010445‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:18015684‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:26685328‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:2690505‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:21308076‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7068107‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:16749732‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:15056379‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:14569282‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7601503‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10220898‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10502538‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:13224329‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:8468595‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCAATGCTGCGTTCCCACATgc < 1:18381387‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCGGTCACGATCGGATGACGAAAGCCATTGCGGAGTTCCCACAGgc > 1:13865969/1‑68 (MQ=255) cGTGTAGCCGGGCAAACTAAAAGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:6621009‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTATACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:25764829‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:12637373‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:27795460‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:23630448‑M2/68‑4 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:17516144‑M2/1‑65 (MQ=255) tgtAGCCGGGCAAACTAAACGCTTTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:8311131‑M2/67‑4 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc < 1:5873681‑M2/68‑6 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:5010918‑M2/1‑63 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:652645‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:7831320‑M2/68‑9 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:11364214‑M2/68‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:19511863‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:21665279‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:18591964‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:18882664‑M2/67‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAAgcagcaatg > 1:7297873‑M2/1‑58 (MQ=255) gCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcg > 1:28291431/1‑67 (MQ=255) aaaCTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCa < 1:25455923/68‑1 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg < 1:4066989/68‑1 (MQ=255) tAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg > 1:1683027/1‑67 (MQ=255) cGCTGTCACGATCGGATGTCGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa < 1:28831703/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:3604796/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:12115601‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:29351254‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:3301482/1‑67 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCCTTCCCACATgccgcaatggctttcgtcagccga > 1:21899171‑M2/1‑44 (MQ=255) cTGTCACGATCGGATGACGAAAGCCAATGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:17289064/1‑66 (MQ=255) tGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct < 1:15389717/68‑1 (MQ=255) gTCACGATCGGAGGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAActt < 1:23391148/68‑1 (MQ=255) cACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAActtct > 1:2160207/1‑68 (MQ=255) aTCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:10699988/68‑1 (MQ=255) tCGGATGACGAAAGCCTTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTtgg < 1:15981266/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCAGATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:15788120/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:20429995/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:22722744/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:21210590/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:20725048/1‑68 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:4796310/68‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:9807584/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:9664125/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:17210805/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:24351246/67‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaag < 1:872380/68‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaag < 1:16377430/68‑1 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGCCGGAACTTCTTGGGCAAAAagaaga > 1:11494758/1‑68 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:11746253/1‑68 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCTCTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:19131632/1‑67 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAgaga > 1:5152243/1‑67 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGCCGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:21022143/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:5359028/1‑68 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:28129420/68‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:25258409/68‑1 (MQ=255) ttGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGt < 1:29146115/68‑1 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:24113585/1‑68 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:2871164/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:26105819/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:559000/1‑68 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:7974109/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:6127654/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:4710431/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:12501405/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:27593774/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCa < 1:24779517/68‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCa < 1:17698242/68‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGGTGgcgc < 1:14190872/67‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:1983903/49‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAtt > 1:20106340/1‑68 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAt < 1:27354612/67‑1 (MQ=255) ccACATGCAGCAATTGCGGCACTTTCTTAACTTATTGGTAAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:9315144/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:13965478/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:28974932/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:13512673/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGTTCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:26460158/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:8983857/68‑1 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATgat > 1:17844850/1‑66 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:23156002/1‑68 (MQ=255) caTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCt > 1:29781000/1‑68 (MQ=255) aTGCAGCAATGGCGGCTCTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTa > 1:22096614/1‑68 (MQ=255) | TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |