| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 261 (0.730) | 40 (0.150) | 16/84 | NT | 17.4% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 184 (0.680) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 340 total aligned reads displayed.
CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGC > CP009273/3630146‑3630279 | ccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGgc > 1:10885022/1‑68 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGgcagc > 1:580648/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgcca < 1:23123728‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgc < 1:22875522‑M1/66‑7 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCAc > 1:19737510/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTAGGCAGCAc > 1:1583413/1‑68 (MQ=255) aCCTGTAACTCTGCGCGCAACGGTTTATGCCGAGTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgc < 1:20800882‑M1/66‑7 (MQ=255) ccTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGGCACCAGACCCGCGCGGGTCtggtgcca < 1:5267178‑M1/68‑9 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:6557125/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:7242611/1‑68 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:4102647/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:13470405/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:17184006/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:5059841/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:1626011/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:25433739/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:8631056/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:2248825/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:11563480/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:11431715/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:7452502/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:11010872/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:20235487‑M1/68‑19 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:4907154‑M1/68‑19 (MQ=255) aGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:2149929/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:26100941/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:29655357/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:1874304/1‑68 (MQ=255) gCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:3285311/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:17517415/1‑67 (MQ=255) cAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:10569457/1‑67 (MQ=255) ggTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc > 1:14622955/1‑68 (MQ=255) aTGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:306314/68‑1 (MQ=255) tGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:22120057/1‑68 (MQ=255) tGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt < 1:1448412/68‑1 (MQ=255) tGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:13714537/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:28257858/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:18421093/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:23795072/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:29438711/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:4541566/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:21308291/1‑68 (MQ=255) gCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:544185/1‑68 (MQ=255) gCAGAGTGAAT‑GACACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCttt > 1:16712022/1‑67 (MQ=255) cAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGGAATCTtat > 1:28849602/1‑68 (MQ=255) cAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:20439639/1‑68 (MQ=255) cAGAGTGAAT‑GGCACCAGACCCGCGCCGGTCGGCAGCACGTTGTGGCCAAATTGTTCGGCAATCTtat > 1:18205113/1‑68 (MQ=255) gTGAAT‑GGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:5760344‑M1/65‑39 (MQ=255) gTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:13518212/1‑68 (MQ=255) gTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:26413350/1‑68 (MQ=255) gTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:3854779/1‑68 (MQ=255) t‑GGCACCAGACCCGCGCGGGTCtggtgccattcacgctgcataaaccgttgctcgaagagttacaggt > 1:25265679‑M1/1‑22 (MQ=255) t‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:25694503/1‑68 (MQ=255) t‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:10282809/1‑68 (MQ=255) t‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:4065251/1‑68 (MQ=255) t‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:17306951/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcagtctgcataaaccgttgctcgatgagttacaggt > 1:28656430‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAGCCAAACGGc > 1:28437164/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCCAACGGc > 1:5353993/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:25012812/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:13226259/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:8918681/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:9559179/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:11761231/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgcttgaagagttacaggtgctg > 1:28062283‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:650758/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:8731908/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:9715878/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:22244312/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:18537685/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:18314882/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:19678856/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:20625037/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:16873150/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:15660205/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:12898989/1‑67 (MQ=255) gACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgg < 1:4723160‑M1/68‑55 (MQ=255) aCCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgg > 1:1262759‑M1/1‑13 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAGACGGCGAcgcg > 1:24534321/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:24903992/1‑67 (MQ=255) cccGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc > 1:7344771‑M1/1‑12 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:7988942/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:19247487/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:14703/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:5959921/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:10031983/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc < 1:27036044/67‑1 (MQ=255) cccGCGCGGGGCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:21963939/1‑67 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:27290629‑M1/1‑7 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc < 1:15095228‑M1/68‑62 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCATTCTTATAACCAAACGGCGACGCGCCCAGc > 1:26716308/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:25120280/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:25907327/1‑67 (MQ=255) cgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGcc > 1:23348229/1‑67 (MQ=255) gggTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcgg < 1:14943‑M1/68‑64 (MQ=255) ggTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCg > 1:20133506/1‑68 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:7632394/67‑1 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:1422779/67‑1 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGc > 1:21897110/1‑68 (MQ=255) ctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtgc < 1:23662299‑M1/67‑67 (MQ=255) | CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAT‑GGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGC > CP009273/3630146‑3630279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |