| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3641246 | 469 (1.300) | 23 (0.120) | 11/62 | NT | 9.2% | intergenic (‑98/‑177) | dinQ/agrA | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/Inactive antisense sRNA |
| ? | CP009273 | 3641677 = | 193 (0.970) | noncoding (24/84 nt) | agrB | Antisense sRNA antitoxin for the DinQ toxin | |||||
Only 100 of 750 total aligned reads displayed.
CATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCAT > CP009273/3641179‑3641313 | tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:4806004/1‑67 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:5043138/1‑67 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:23491465/1‑67 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:12043549/1‑67 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCg > 1:23298628/1‑67 (MQ=255) tCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCc > 1:23635966‑M1/1‑66 (MQ=255) cGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGcc > 1:20735666/1‑68 (MQ=255) ttACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCaga < 1:26695242/68‑1 (MQ=255) ttACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCaga < 1:8974506/68‑1 (MQ=255) ttACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCaga < 1:18681986/68‑1 (MQ=255) tACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCagag < 1:29402097/68‑1 (MQ=255) aCTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGc > 1:26926685/1‑68 (MQ=255) aCTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGc < 1:18309517/68‑1 (MQ=255) tCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCa > 1:10269124/1‑67 (MQ=255) cATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATc < 1:5409686/68‑1 (MQ=255) aTCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCAtg > 1:16585195/1‑66 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:20858358/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:17774302/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:8041567/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:21837857/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:24183869/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:8714748/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:383138/1‑68 (MQ=255) ccACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGt > 1:7609088/1‑68 (MQ=255) cACTGCCTGTCACGTCGAATGTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagagccaccaac < 1:6638083‑M1/68‑17 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa > 1:8360272/1‑68 (MQ=255) aCTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTa > 1:11911884/1‑68 (MQ=255) tGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAAc > 1:28115066/1‑68 (MQ=255) tGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCAGGCCAGAGCATCAGTTAAc > 1:25736004/1‑68 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCcgccagagccaccaactaagg > 1:7087502‑M1/1‑47 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTaaaag > 1:15927575/1‑65 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACg > 1:21328993/1‑67 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACg > 1:12799541/1‑67 (MQ=255) ccTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACg > 1:26184450/1‑67 (MQ=255) cTGTCACTTCGACTGTCTAATTGTTAGATAAGAACTCTCTCACTCCagccagagccaccaactcagg < 1:23839999‑M1/67‑22 (MQ=255) cTGTCACGTCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagagccaccaactcagg < 1:4523949‑M1/67‑22 (MQ=255) cTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGc < 1:4021751/68‑1 (MQ=255) tCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacc > 1:23972302/1‑68 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCTGGCCAGAGCATCAGTTAACGGcacca < 1:1144761/68‑1 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGctcc < 1:19987420/67‑1 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca < 1:13499847/68‑1 (MQ=255) cACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca < 1:14118665/68‑1 (MQ=255) aCGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCagccagagccacaaaatcagggctgga > 1:7378253‑M1/1‑41 (MQ=255) aCGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGcacca > 1:22060001/1‑67 (MQ=255) cGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCaccacc < 1:10718049/68‑1 (MQ=255) cGGCGCATGCCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCaccacc < 1:21559623/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:20178470/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc > 1:29134589/1‑68 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc > 1:27351222/1‑68 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:14973024/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:25383036/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:10015608/68‑1 (MQ=255) ggCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCAccc < 1:7869715/68‑1 (MQ=255) ttGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCa > 1:5948585/1‑68 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgac > 1:15722624‑M1/1‑25 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAg > 1:13143846/1‑68 (MQ=255) tGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAg > 1:16256085/1‑68 (MQ=255) tGTTAGATAAGAACTCTCTCACAACGGGCAGATCATCAGTTAACGGCCCCCGACGGAATTCTGCCCAg > 1:9318988/1‑68 (MQ=12) tGTTAGATAAGAACTATCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgac > 1:192993‑M1/1‑25 (MQ=255) gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAgg > 1:14533614/1‑68 (MQ=255) gTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAgg > 1:27914509/1‑68 (MQ=255) tAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGa < 1:11079349/67‑1 (MQ=255) aGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACt < 1:17990409/68‑1 (MQ=255) gATAAGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaag > 1:334777‑M1/1‑20 (MQ=255) ataataACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGaacca < 1:16995616/45‑1 (MQ=25) aTAAGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaag > 1:26287226‑M1/1‑19 (MQ=255) aTAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACt > 1:13243335/1‑53 (MQ=255) aaGAACTCTCTCACTCCagccagagcccccaactcagggctggaaagtaaaaaaccgacgcaaagtcg > 1:13919370‑M1/1‑17 (MQ=255) aaGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcg > 1:27690926‑M1/1‑17 (MQ=255) aaGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcg > 1:10507038‑M1/1‑17 (MQ=255) aaGAACTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcg > 1:12365595‑M1/1‑17 (MQ=255) aaCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGaaa > 1:20382849/1‑67 (MQ=255) aCTCTCTCACTCCagccagagccaccgactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:6378783‑M1/1‑13 (MQ=255) aCTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:12995120‑M1/1‑13 (MQ=255) aCTCTCTCACTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggttt > 1:28336311‑M1/1‑13 (MQ=255) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGc < 1:14794216/68‑1 (MQ=255) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGc < 1:15492764/68‑1 (MQ=255) aCTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGc > 1:29735474/1‑68 (MQ=255) ctctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGtt < 1:2114806/68‑1 (MQ=255) tctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACt < 1:28795840/56‑1 (MQ=255) ctcACTCCagccagagccaccaactcagcgctggaaagtaaaaaaccgacgcaaagtcggttttttt > 1:17313373‑M1/1‑8 (MQ=255) ctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTa > 1:2273493/1‑68 (MQ=255) ctcACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTa > 1:2236217/1‑68 (MQ=255) aCTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacg > 1:7725853‑M1/1‑5 (MQ=255) cTCCagccagagccaccaactcagggctggaaagtaataaaccgacgcaaagtcggtttttttacgtc < 1:1429547‑M1/68‑65 (MQ=255) cTCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:3104852‑M1/68‑65 (MQ=255) cTCCagccagagccaccaactcagagctggaaagtaaaaaaccgacgcaaagtcggtttttttacgtc < 1:1525265‑M1/68‑65 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:430299/68‑1 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:12603326/68‑1 (MQ=255) cTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcg < 1:17632783/68‑1 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:9606194‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:18963097‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:19570278‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:24772846‑M1/1‑3 (MQ=255) tCCagccagagccaccaactcagggctggaaagtaaaaaaccgacgcaaagtcggtttttttacgt > 1:5631707‑M1/1‑3 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:21727920/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:23154703/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:11238743/1‑68 (MQ=255) tCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATgcgc > 1:2518048/1‑68 (MQ=255) cagccagagccaccaactcagggctggaaagtaaaaaccgacgcaaagtcggtttttttacgtcctga > 1:2444047‑M1/1‑1 (MQ=255) | CATCCGCTTACTCATCCACTGCCTGTCACGGCGCATGTCTCATTGTTAGATAAGAACTCTCTCACTCCGGCCAGAGCATCAGTTAACGGCACCACCCGTACTTCTGACCAGGACTTTGAAAGCGTTTATGCGCAT > CP009273/3641179‑3641313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |