| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 232154 | 217 (0.600) | 11 (0.040) | 5/92 | NT | 5.5% | coding (336/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids |
| ? | CP009273 | = 232160 | 197 (0.670) | coding (330/468 nt) | rnhA | ribonuclease HI, degrades RNA of DNA‑RNA hybrids | |||||
Only 100 of 351 total aligned reads displayed.
AGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAC > CP009273/232093‑232227 | aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:15535567/1‑68 (MQ=255)aGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt > 1:13105931/1‑68 (MQ=255) cgttcgttTTCCGGGTGTCCCGCATGGCCTTTAACCAATTCACATTTGATATGATGCTGCCCCAATgc < 1:23953568‑M2/68‑3 (MQ=255) cgttcgttTTCCGGGTGTCAGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCACAATga < 1:20470789‑M2/68‑3 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:456680/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAAt < 1:27731938/65‑1 (MQ=255) gttcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgca < 1:11026759‑M2/68‑4 (MQ=255) tcgttTTCCGGTTGGCCGGCATGGCCTTTTTCCCATTCCCATTTGAATTGATGCTGCCCCAATgcagc > 1:3086470‑M2/1‑63 (MQ=255) tcgttTTCCGGGTTTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:25883354‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:23493419‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:8499244‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:12357298‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:6789867‑M2/1‑63 (MQ=255) tcgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagc > 1:20683814‑M2/1‑63 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:17086178‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:25095041‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:25566056‑M2/1‑62 (MQ=255) cgttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagca > 1:12012843‑M2/1‑62 (MQ=255) gttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcat > 1:139641‑M2/1‑61 (MQ=255) gttTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcat > 1:18055809‑M2/1‑61 (MQ=255) ttttCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatc < 1:15037215‑M2/68‑9 (MQ=255) ttttCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatc < 1:11491784‑M2/68‑9 (MQ=255) tttCCGGGGGTCCGGCATGGCCTTTAACACTTTCCCATTTGTTTTTAAGCTGCCCCAATGCAGCAt < 1:16641504/66‑1 (MQ=255) cGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGAc > 1:16951105/1‑68 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg < 1:2640371/68‑1 (MQ=255) gggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACg < 1:18648868/68‑1 (MQ=255) ggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCacgacgg > 1:2335815/1‑67 (MQ=255) ggTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGCCGt > 1:14202620/1‑68 (MQ=255) tgtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGtt < 1:21460533/67‑1 (MQ=255) gtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGc < 1:28895239/68‑1 (MQ=255) gtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGc < 1:27441503/68‑1 (MQ=255) gtCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGc < 1:7506869/68‑1 (MQ=255) ggccggCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatg > 1:10372842‑M2/3‑50 (MQ=255) ccGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCGGCCCCAATgcagcatcaaatcaaatggg > 1:26697212‑M2/1‑48 (MQ=255) ggCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCaga < 1:10904872/68‑1 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:27127528/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:24500378/1‑67 (MQ=255) aTGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAgaga > 1:24263021/1‑67 (MQ=255) ggCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATgcagcatcaaatcaaatgggaatgggt > 1:6274500‑M2/1‑41 (MQ=255) ggCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCg < 1:3248862/68‑1 (MQ=255) gCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCg > 1:10978529/1‑67 (MQ=255) ccTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGAc > 1:3877697/1‑68 (MQ=255) ccTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGAc > 1:21763935/1‑68 (MQ=255) aaCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttt < 1:19637047/68‑1 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:14466439/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:4030664/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:10455020/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:8255231/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:18177674/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAttttt > 1:16430687/1‑68 (MQ=255) aCCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGAACGACattatt > 1:8386580/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:28734790/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:691324/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:8030445/1‑68 (MQ=255) cccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:15129465/1‑68 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:1068506/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:557908/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:7323353/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:14709557/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:8676889/1‑67 (MQ=255) ccattcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:27265351/1‑67 (MQ=255) ccattcccattTGATTTGATGCAGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACAtttttt > 1:890431/1‑67 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg < 1:22182586/68‑1 (MQ=255) tcccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTgg > 1:23188209/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:29686149/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:903732/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:18941168/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:19378792/1‑68 (MQ=255) cccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:5341690/1‑68 (MQ=255) cacattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGt > 1:9627004/3‑68 (MQ=255) ccattTGATTTGATGCTGCGCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt < 1:5885720/68‑1 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt > 1:26081628/1‑68 (MQ=255) ccattTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGtt < 1:5079469/68‑1 (MQ=255) tttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTg > 1:4325308/1‑65 (MQ=255) ttgatGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCt > 1:16817283/1‑67 (MQ=255) atGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCgg > 1:4857146/1‑68 (MQ=255) tgctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGt < 1:13196181/68‑1 (MQ=255) tgctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGt > 1:10020466/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTGTGCGGtt > 1:6063618/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:23796646/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:13645231/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:24588308/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:19978360/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:15217616/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:12111254/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt > 1:16048712/1‑68 (MQ=255) gctgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGtt < 1:17393837/68‑1 (MQ=255) tgcCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGttt < 1:18300455/67‑1 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:19051223/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:22259165/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:230552/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa > 1:12591851/1‑68 (MQ=255) cccAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCa < 1:2528198/68‑1 (MQ=255) tGCAGCATCAAGACGTTGCTAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:27871282/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:6988379/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:15865049/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:8405712/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:11784330/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAc > 1:29259868/1‑68 (MQ=255) tGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGGTTTTTGTCTGCGGTTTTCCAGCCAc > 1:10100778/1‑68 (MQ=255) | AGCGTTCGTTTTCCGGGTGTCCGGCATGGCCTTTAACCCATTCCCATTTGATTTGATGCTGCCCCAATGCAGCATCAAGACGTTGCCAGAGATCGACATTTTTTACTGGTTTTTTGTCTGCGGTTTTCCAGCCAC > CP009273/232093‑232227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |