| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4603949 = | 163 (0.450) | 5 (0.020) | 4/94 | NT | 3.2% | coding (652/780 nt) | yjjV | putative DNase |
| ? | CP009273 | 4603980 = | 162 (0.540) | coding (683/780 nt) | yjjV | putative DNase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 393 total aligned reads displayed.
ACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAAT > CP009273/4603913‑4604047 | aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg < 1:945995/68‑1 (MQ=255)aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:861898/1‑68 (MQ=255)aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:2750694/1‑68 (MQ=255)aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:26190433/1‑68 (MQ=255)aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg > 1:11896372/1‑68 (MQ=255)aCCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCg < 1:18555207/68‑1 (MQ=255) tcccggcgcaactcgcaaagcacggcgaacacacgggcagcctgctccgggcggttaggctgcccgtg < 1:1015186‑M2/3‑1 (MQ=255) gACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCgtgt > 1:16423759/1‑68 (MQ=255) cgccgcATAGGCCGCTCACCGGTTTGCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTc < 1:22836667/68‑1 (MQ=255) gcCGGATATGCCGCTCCACGGTGTTCAGTGGCAGCCTAACCGCCCGGAGCAGTCTGCCCGTGTGTTc < 1:25783671/67‑1 (MQ=255) gcCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTc < 1:14919279/67‑1 (MQ=255) cGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGc < 1:12117928/67‑1 (MQ=255) tatGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTg < 1:1292711/67‑1 (MQ=255) tGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCtt > 1:9855728/1‑68 (MQ=255) tGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCtt > 1:15411200/1‑68 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:169699/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:3787806/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:4151388/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:22578193/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:12567151/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:15978838/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:25072722/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:933920/1‑67 (MQ=255) ccGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCttt > 1:13646486/1‑67 (MQ=255) cGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTg < 1:11680122/67‑1 (MQ=255) cTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGa > 1:29732470/1‑68 (MQ=255) cAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGt < 1:27906865/68‑1 (MQ=255) aCGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGtt > 1:2669132/1‑67 (MQ=255) cGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTgc < 1:605258/68‑1 (MQ=255) tCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCggg > 1:4623713/1‑68 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:4255249/1‑67 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:6756945/1‑67 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:20402041/1‑67 (MQ=255) ggggCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGaa > 1:23298194/1‑67 (MQ=255) GGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcg < 1:8901682‑M1/68‑1 (MQ=255) GGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGAGAACcg < 1:24180695‑M1/68‑1 (MQ=255) cGCCTAACCCCCCGGAGCATGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggc > 1:1655326‑M1/2‑67 (MQ=255) AGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACcggcg < 1:6266957‑M1/68‑1 (MQ=255) AGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGCGCTTTGCGAGTTGCGCCGGGAACcggcg < 1:22094350‑M1/68‑1 (MQ=255) CCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGa < 1:28509960‑M1/68‑1 (MQ=255) aCCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATgag < 1:9634852/68‑1 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:4837067/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:27306927/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:15519072/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:17416209/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:1113584/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:23907913/1‑68 (MQ=255) cGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGAt > 1:1096471/1‑68 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc > 1:9154471/1‑68 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc < 1:18708773/68‑1 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc < 1:6989642/68‑1 (MQ=255) ccGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTAGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgc > 1:15799897/1‑68 (MQ=255) cGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTgcg < 1:21900794/68‑1 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:27125601/1‑67 (MQ=255) gCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCaa > 1:24388488/1‑67 (MQ=255) aaggctgcccGTGTGTTCGCCGTGCTTTTCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGc < 1:29340344‑M2/58‑1 (MQ=255) aggctggccGTGTGTTCGCCGTGGTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAg < 1:26064295‑M2/57‑1 (MQ=255) aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAg < 1:12424450‑M2/57‑1 (MQ=255) aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGc < 1:3334638‑M2/58‑1 (MQ=255) aggctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGc < 1:28206620‑M2/58‑1 (MQ=255) gctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:22330778‑M2/8‑68 (MQ=255) gctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:20551946‑M2/8‑68 (MQ=255) ctgcccGTTTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:28835394‑M2/61‑1 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:28996663‑M2/61‑1 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:10006498‑M2/7‑67 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:14499396‑M2/61‑1 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:2543994‑M2/61‑1 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:25298897‑M2/7‑67 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt > 1:23722673‑M2/7‑67 (MQ=255) ctgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGtt < 1:18192967‑M2/61‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:5337722‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:13870388‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:10608524‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:1561957‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:16075318‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:8295068‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:7399168‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:16895101‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:6211474‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:26502561‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:19097656‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:20147380‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:20715002‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:19328620‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:11543661‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:23519932‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:24667878‑M2/63‑1 (MQ=255) tgcccGTGTGTTCGCCGTGCGTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGc < 1:21265986‑M2/63‑1 (MQ=255) gcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCt < 1:14702051‑M2/64‑1 (MQ=255) gcccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCt < 1:13240075‑M2/64‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTa < 1:19890219‑M2/66‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTa < 1:5776991‑M2/66‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTa < 1:17673755‑M2/66‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTa < 1:21169116‑M2/66‑1 (MQ=255) ccGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTa < 1:29217912‑M2/66‑1 (MQ=255) cGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTaa > 1:11418427‑M2/2‑68 (MQ=255) cGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTaa < 1:8255395‑M2/67‑1 (MQ=255) cGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTaa < 1:17178873‑M2/67‑1 (MQ=255) gtgtgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTtaat < 1:24989383/68‑1 (MQ=255) gtgtgtTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTtaat < 1:7956771/68‑1 (MQ=255) | ACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAAT > CP009273/4603913‑4604047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |