| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3701790 = | 83 (0.180) | 5 (0.010) +GTTGAGCAGGCG |
4/88 | NT | 6.4% | intergenic (‑725/+186) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | 3701799 = | 103 (0.220) | intergenic (‑734/+177) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
GGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701833‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTC > CP009273/3701799‑3701845 |||||||||||| GGCGAGTAATCCTCTATCACCGCCCAAATTCGAAAAGCCTGCGCGTTGGGCAGGGGTTTGGAATTTGG > 1:16526978/1‑68 ATCACCGACCAAATTCGAAAAGCCTGCTCGTTGAGCAGGCGTTTCGAATTTGGTCGGTGATAGAGGAT > 1:38995597/1‑68 ACCGACCAAATTCGAAAAGCCTGGTCGTTGAGGAGGCGTTTGGATTTTGGGCGGTGATAGTGGATTAC > 1:13760959/1‑68 caaAAAAGCCTGCTCGTTGAGCAGGCGTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCG > 1:14350693/4‑68 GCCTGCTCGTTGAGAATGCGTTTCGAATTTGGTCGTTGATAGAGGATTACTCGCCACTTCGTGGCTC > 1:10590087/1‑67 |||||||||||| GGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701833‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTC > CP009273/3701799‑3701845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |