| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 420 (0.890) | 24 (0.060) | 10/96 | NT | 6.4% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 346 (0.860) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 104 total aligned reads displayed.
AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > CP009273/3999197‑3999262 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:18414762/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:3821177/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:4149155/1‑68AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:27085158/1‑68 gaaTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA > 1:4371229/4‑67 ATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:2704889/1‑68 TTCAACACTTCCGCCTGCGCCACATTCCCCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:14290151/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:548782/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:29444656/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC < 1:3157261/67‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:28468706/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:33768563/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:21143920/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:19331376/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:27143930/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:26508137/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:26797449/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:37093761/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:38595957/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:15852919/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:15457905/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:15188922/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:11898786/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:7057729/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGC > 1:2708057/1‑67 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA < 1:5243077/65‑1 TTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCA < 1:5289784/65‑1 TTCAACACTTCCGCCTGCGCCACATTAACCCCGATTGCCTCAAATAAAAACAGGCGCTATTTTCAGC > 1:23250302/1‑67 CAACCCTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:53530/1‑66 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:29053598/1‑66 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:11826218/1‑66 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:30212590/1‑66 CAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCG > 1:27532553/1‑66 AACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT < 1:2142581/68‑1 AACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT < 1:24052654/68‑1 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:18991192/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:34034258/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:6364287/1‑67 ACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCT > 1:7110433/1‑67 ACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTT < 1:16724669/68‑1 CTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTT < 1:28290970/68‑1 CGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTAT < 1:25099705/68‑1 GCGCCACATGCACCCCGATTGCCTGAAATAAACCCAGGCGCTATTTTCCGCGCCTGTTTTTATTTCAG < 1:33096683/68‑1 CACATTCACCCCGCTTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:32747767/67‑1 CACATTCACCCCGATTGCCTGAAATAAAACCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:6985376/67‑1 CACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:10382570/67‑1 CACATTCACCCCGATTCCCTGAAATAAAACCCGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCA < 1:35674584/67‑1 ACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAAT < 1:38825176/68‑1 TTCACCCCGCTTGCCTGAAAAAACCACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGG < 1:35605154/68‑1 TCACCCCGCATGCCTGAAATAAAAACAGCCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:16072848/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:7820792/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:12095377/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:5793298/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:25180923/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:14397655/68‑1 TCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:14504184/68‑1 TCACCCCGATTGCCATAACTAAAACCCGGCGCTATTTCCAGCGCCTGTTTTTATTTCAGGCAATCGGG < 1:1397944/68‑1 TCACCCCCATTCCCTGAAATAAAATCAGGCGCTAATTTCAGCGCCTGTTTTTATTTCAGGCTATCGGG < 1:6031647/68‑1 CACCCCGATTCCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGG < 1:26241531/68‑1 CCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTG < 1:26930798/68‑1 CCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTG < 1:29129533/68‑1 CCCGATTGCCTGAAATAAAACCCGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTta < 1:5994580/68‑3 GAAAAAAAACCAGGCGCTATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAG < 1:16061315/68‑1 AAAAACACCCGCCATTTTCAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGA < 1:7353169/68‑1 GCGCCTGTTTTTATTTCAGGCTATCGGGGTGAATGTGGCGCAGGCTGAAGTGTTGAATCTGGAGTCCG > 1:29441921/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:21668764/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:5214903/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:28756517/1‑68 GCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCG > 1:25947335/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGTCGGAAGTGTTGAATCTGGAGTCCGGA < 1:27588585/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:13462584/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:22865632/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:5735517/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:5741656/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:5796945/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:27150693/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:12009757/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:10070920/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:7676606/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:26997450/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:8566939/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:9096842/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:36227880/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:22987850/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:21407056/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:33907695/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:23567859/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:13541812/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:24144481/1‑68 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:28851442/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:4411471/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGGCCGGA < 1:18333543/68‑1 GCCTGTTTTTATTTCAGGCAATCGGGGTGAATGGGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:25313376/68‑1 GCCTGTTCCTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA < 1:7169492/68‑1 CCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGA > 1:37416299/1‑67 CTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:16214695/68‑1 CTGTTTTTATTTCAGGCAATCGGCGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGC < 1:21261147/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:1285765/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:35466829/68‑1 TGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT < 1:14267960/68‑1 AGATTCAACACTTCCGCCTGCGCCACATTCACCCCGATTGCCTGAAATAAAAACAGGCGCTATTTTCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3999249‑3999175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcctgTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCT > CP009273/3999197‑3999262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |