| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3999175 = | 420 (0.890) | 24 (0.060) | 10/96 | NT | 6.4% | intergenic (+84/‑49) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase |
| ? | CP009273 | 3999197 = | 346 (0.860) | intergenic (+106/‑27) | pldA/recQ | outer membrane phospholipase A/ATP‑dependent DNA helicase | |||||
Only 100 of 544 total aligned reads displayed.
GGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999109‑3999241 | agctccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCa < 1:1285765‑M1/2‑1 (MQ=255) gctccggactccagattcaacacttccgcctgcgccacattcacgccgattgcctgaaataaaaaCAg < 1:21261147‑M1/3‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc > 1:10070920‑M1/64‑68 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc < 1:21407056‑M1/5‑1 (MQ=255) tccggactccagattcaacacttccgcctgcgccacattcaccccgattgcctgaaataaaaaCAGgc > 1:26997450‑M1/64‑68 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAgg < 1:11540392/67‑1 (MQ=255) aaaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgc < 1:37298156/68‑1 (MQ=255) aaTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcg < 1:19161844/68‑1 (MQ=255) cggactccagattcaacacttcagcctgcgccacattcaccccgatagcctgaaataaaaaCAGgcgc > 1:29441921‑M1/62‑68 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCATTTTCTCGCGCAGgcgc < 1:27744793/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:7544946/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:4973751/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:38789492/68‑1 (MQ=255) aTCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGgcgc < 1:14402212/68‑1 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg < 1:34198306/68‑1 (MQ=255) cTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTg < 1:8257794/68‑1 (MQ=255) aaTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaa < 1:37764798/67‑1 (MQ=255) aTCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGaaaa < 1:34836723/67‑1 (MQ=255) ccAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATa > 1:4613605/1‑67 (MQ=255) tCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTg < 1:13130192/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:1649189/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:30853460/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt > 1:1784927/1‑68 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:20414085/68‑1 (MQ=255) ccAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGt < 1:12021598/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:13602008/68‑1 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt > 1:33786432/1‑68 (MQ=255) cAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGtt < 1:12572127/68‑1 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:31356980/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:29923073/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:28518065/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:10589733/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:2616957/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:24073024/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:23763926/1‑68 (MQ=255) aTTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTa > 1:22375700/1‑68 (MQ=255) ttACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAt < 1:32230042/68‑1 (MQ=255) tACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAtt > 1:7180929/1‑68 (MQ=255) aCCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTAtt > 1:9004090/1‑67 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAATATAGCGCCTGTTTTTATTTCa > 1:668317/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:24929416/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:25233965/1‑68 (MQ=255) ccTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCa > 1:12348053/1‑68 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:17441460/68‑1 (MQ=255) tcAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCa < 1:16832823/68‑1 (MQ=255) cAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:15644842/1‑68 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:19888383/1‑67 (MQ=255) agagACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCaa > 1:28224564/1‑67 (MQ=255) gagaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATc > 1:30628838/1‑68 (MQ=255) agaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCg > 1:32555714/1‑68 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:22883505/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAAt < 1:18482108/65‑1 (MQ=255) gaCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgg > 1:31889479/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:3694273/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg > 1:8738377/1‑68 (MQ=255) aCTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTGTTATTTCAGGCAATCggg > 1:18112033/1‑68 (MQ=255) cTATAAGCTTTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:36396983/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:15143058/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgggg < 1:33587621/68‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:2899249/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:14859834/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCggg < 1:2303888/67‑1 (MQ=255) cTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCgg < 1:35340118/66‑1 (MQ=255) aaaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTg < 1:4103554/68‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGGAAATAGCGCCGGGTTTTAGTTATGGCAATCGGGGTGa < 1:1397944‑M1/47‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGGCTGTTTTTATTTCAGGCATGCGGGGTGa < 1:16072848‑M1/47‑1 (MQ=255) cccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:5793298‑M1/47‑1 (MQ=255) aaaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGa < 1:32797629/68‑1 (MQ=255) ccgattgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGTGGTTTTTTCAGGCAAGCGGGGTGaa < 1:35605154‑M1/48‑1 (MQ=255) aaGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGaa < 1:38425130/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:10940806/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:4384324/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:22517717/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:14755186/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:20619414/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:13338549/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:36768287/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt > 1:36194445/1‑68 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:11262935/68‑1 (MQ=255) aGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAt < 1:24387395/68‑1 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCATTCGGGGTGAAtg > 1:19623408/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:23460024/1‑68 (MQ=255) gCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAAtg > 1:36006375/1‑68 (MQ=255) ttGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTgg < 1:38925261/68‑1 (MQ=255) tgcctgaaataaaaaCAGGCGCTGAAAATAGCGCCTGGTTTTATTTCAGGCAATCGGGGTGAAtgtg < 1:6985376‑M1/52‑1 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:26541119/1‑67 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:27422956/1‑67 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:28769046/1‑67 (MQ=255) gCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGgc > 1:29257939/1‑67 (MQ=255) ctgaaataaaaaCAGGCGCGGAAAATAGCGCCTGGGTTTATTTCAGGCAATCGGGGTGCATGTGgcgc < 1:33096683‑M1/56‑1 (MQ=255) aGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCa > 1:2273500/1‑68 (MQ=255) gTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg > 1:38215141/1‑68 (MQ=255) gTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg > 1:9333327/1‑68 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:25928645/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAgg < 1:38013603/67‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAg < 1:6292304/66‑1 (MQ=255) ttCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGc < 1:5944648/68‑1 (MQ=255) tcGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGa > 1:25424293/1‑68 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg < 1:5337040/68‑1 (MQ=255) gcAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAgtg > 1:21903059/1‑68 (MQ=255) | GGCAAATCTGGAATCCAGCATCCAGGATTACCCTCTCAGAGACTAAAAGCATTGCAGTTTCTCGCGCAGGCGCTGAAAATAGCGCCTGTTTTTATTTCAGGCAATCGGGGTGAATGTGGCGCAGGCGGAAGTG > CP009273/3999109‑3999241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |