| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4225304 = | NA (NA) | 6 (0.020) | 5/90 | NT | NA | coding (1619/1650 nt) | pgi | glucosephosphate isomerase |
| ? | CP009273 | 4225339 = | NA (NA) | intergenic (+4/‑495) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
Only 100 of 138 total aligned reads displayed.
GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4225379‑4225304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > CP009273/4225339‑4225405 ggtTGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:29993209/65‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGag > 1:36967907/1‑66GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:10834512/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG > 1:7194198/1‑68GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:6012092/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:35089967/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:28198908/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:27485006/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:26879022/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:26073741/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:23057169/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:20348333/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:19652961/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:1933620/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:16910965/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:13856051/68‑1GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:12259049/68‑1 GATGCGGCGTGATCGCCTTATCCGGCCTACATATCGAGGATGATTATCCGCGCCTCGCTTTATAGCGG > 1:6422090/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGCCGATGATTAACCGCGCCACGCGTTATTGCGG > 1:9136281/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGt > 1:20466063/1‑67 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:16557171/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:21180992/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:1474520/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:19778175/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:3911480/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:15022301/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:6195199/1‑68 ATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT > 1:7929158/1‑68 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT > 1:31871725/1‑68 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:19348214/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:19390866/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:14756106/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:806677/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:25367282/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:23816257/67‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:35378275/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:9011561/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:1587652/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:9522787/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:14157814/1‑68 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAAT < 1:174530/68‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:22443596/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:32507087/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:20034511/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:27740537/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:13835192/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:4112359/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:256727/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:4353284/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:19044208/67‑1 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:2825448/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:27815878/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 1:31255578/67‑1 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 1:10020272/67‑1 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 1:21100245/67‑1 ACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGT < 1:21657555/67‑1 GCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGA < 1:22660928/68‑1 TTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATAT < 1:33480655/68‑1 CCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAG > 1:2727236/1‑68 CCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAG < 1:20832886/68‑1 CCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAG < 1:31674988/68‑1 GCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGA < 1:38576484/68‑1 GCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGA > 1:38389298/1‑68 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAT < 1:38792018/67‑1 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAT < 1:1560902/67‑1 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAT < 1:27299126/67‑1 TAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCG < 1:36914270/67‑1 TAATCATCGGCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGA < 1:33063343/68‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:19170478/68‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:39053650/68‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:18623980/68‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:18536548/68‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:35189141/68‑1 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:11580531/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:2208264/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:38152501/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:23751421/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:30198988/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCG < 1:19601360/45‑1 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCG < 1:26833857/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:8091362/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:8954152/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:7738147/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:8968678/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:18232286/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:2424529/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:30996250/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:23290082/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:24481478/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:25777448/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:13205137/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:1996480/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:13089260/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:12346314/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:34311813/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:34264909/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:2833695/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:12417146/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:32383249/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:30688361/1‑68 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4225379‑4225304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > CP009273/4225339‑4225405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |