| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4225304 = | NA (NA) | 6 (0.020) | 5/90 | NT | NA | coding (1619/1650 nt) | pgi | glucosephosphate isomerase |
| ? | CP009273 | 4225339 = | NA (NA) | intergenic (+4/‑495) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
Only 100 of 683 total aligned reads displayed.
AACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACG > CP009273/4225237‑4225371 | ccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgat > 1:1996480‑M1/68‑68 (MQ=255)ccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgat > 1:34264909‑M1/68‑68 (MQ=255)ccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgat > 1:8437203‑M1/68‑68 (MQ=255)ccgcgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgat > 1:9044235‑M1/68‑68 (MQ=255) aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTG < 1:38956334‑M1/68‑1 (MQ=255) aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTG < 1:24619595‑M1/68‑1 (MQ=255) aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTG < 1:23266690‑M1/68‑1 (MQ=255) aCCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCT < 1:22508957‑M1/67‑1 (MQ=255) cGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGAT > 1:21487547‑M1/1‑68 (MQ=255) gtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGAtt < 1:18536548‑M1/5‑1 (MQ=255) tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:24250841‑M1/68‑1 (MQ=255) tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:24951993‑M1/68‑1 (MQ=255) tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC < 1:15480662‑M1/68‑1 (MQ=255) tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC > 1:20437989‑M1/1‑68 (MQ=255) tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC > 1:35578858‑M1/1‑68 (MQ=255) cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACC > 1:29066280‑M1/1‑67 (MQ=255) tcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGc > 1:38389298‑M1/58‑68 (MQ=255) tGCCAGAGCTGAAAGATTATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC < 1:37246073‑M1/68‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC < 1:30732940‑M1/68‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC < 1:27115261‑M1/68‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC < 1:22659651‑M1/68‑1 (MQ=255) tGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGC < 1:11489971‑M1/68‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATTGTCTGATTAACCGCt < 1:37634218/68‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt > 1:23999580/1‑68 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt < 1:23552675/68‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt > 1:5974334/1‑68 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt < 1:25239715/68‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt < 1:21713091/68‑1 (MQ=255) gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCt < 1:13326252/68‑1 (MQ=255) cAGAGGTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat < 1:27244069/68‑1 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat < 1:12872676/68‑1 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat < 1:28658370/68‑1 (MQ=255) cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCtat < 1:32143169/68‑1 (MQ=255) agCTGAAAGATGATAGAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATaaa > 1:18613185/1‑68 (MQ=255) gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATaaa > 1:28034139/1‑67 (MQ=255) cTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGc > 1:25629995/1‑68 (MQ=255) tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAg < 1:14331493/66‑1 (MQ=255) tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGc < 1:16626810/67‑1 (MQ=255) aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTg < 1:6099028/67‑1 (MQ=255) aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTg > 1:31853193/1‑67 (MQ=255) aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTg > 1:10999980/1‑67 (MQ=255) aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTg > 1:37942389/1‑67 (MQ=255) aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgc < 1:10160882/68‑1 (MQ=255) gatgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGgc > 1:29475698/1‑67 (MQ=255) cggatgcggcgtgaacgccttatccggcctacatatcgacgatga < 1:19601360‑M1/3‑1 (MQ=255) tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcg > 1:31174581‑M2/1‑65 (MQ=255) tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcg > 1:17223822‑M2/1‑65 (MQ=255) tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcg > 1:22991286‑M2/1‑65 (MQ=255) tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAAAGGTCTGATTAACCGCTATAAAGCGTGGCgcg > 1:28427521‑M2/1‑65 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggt > 1:26544159‑M2/1‑62 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggt > 1:9340200‑M2/1‑62 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggt > 1:36140567‑M2/1‑62 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTACAAAGCGTGGCgcggt > 1:29837657‑M2/1‑62 (MQ=255) tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGGCTGATTAACCGCTATAAAGCGTGGCgcggt > 1:4163759‑M2/1‑62 (MQ=255) aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggttaat > 1:1384208‑M2/1‑59 (MQ=255) aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggttaa < 1:29164087‑M2/67‑9 (MQ=255) aTCAGCAGCCACGAAAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc < 1:6945453/68‑1 (MQ=255) tCAGCGGCCACGATAGCTCGACCAATGGTCTGATTAACCGCgccacgctttatagcggttaatcagac < 1:16966294‑M1/68‑28 (MQ=255) tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCgcggttaatcagac > 1:29958542‑M2/1‑54 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgt < 1:11887031/68‑1 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgt < 1:8039838/68‑1 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgt < 1:4683300/68‑1 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgt < 1:25822997/68‑1 (MQ=255) cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgt < 1:18920942/68‑1 (MQ=255) gcagcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtcg > 1:22047234/1‑68 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc < 1:5654822/65‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc < 1:8932015/65‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc < 1:3298857/65‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc < 1:7302861/65‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc < 1:35854070/65‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa < 1:15978622/67‑1 (MQ=255) agcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa < 1:19241608/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:5281340/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:7561652/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:35215910/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:34583892/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:16455227/67‑1 (MQ=255) cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata < 1:10515160/66‑1 (MQ=255) tccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTa < 1:32499631‑M1/48‑1 (MQ=255) cGAGAGCTCGCCCACTCGCCTGATTAACCGCgccacgcgttatagcggttaatcagaccattggtcga < 1:1519639‑M1/68‑38 (MQ=255) gATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat < 1:17522190/64‑1 (MQ=255) tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg > 1:36632501/1‑67 (MQ=255) tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg < 1:18111546/67‑1 (MQ=255) tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg < 1:21084074/67‑1 (MQ=255) tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg < 1:3026796/67‑1 (MQ=255) cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg > 1:24740069/1‑68 (MQ=255) tCGACCAATGGTCTTATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:3373798/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:31013029/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:27675418/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:36922244/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:2022350/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg < 1:38760558/67‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg < 1:12522992/66‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGa < 1:30544266/68‑1 (MQ=255) tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGa < 1:6540618/68‑1 (MQ=255) atatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATaa < 1:33480655‑M1/58‑1 (MQ=255) aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATaa > 1:14795881/1‑68 (MQ=255) ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt > 1:3503972/1‑67 (MQ=255) gTCTGATTAACCGCgccacgctttatagcggttaatcagaccattggtcgagctatcgtggctgctga > 1:9767596‑M1/1‑14 (MQ=255) tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTc > 1:16100949/1‑67 (MQ=255) | AACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACG > CP009273/4225237‑4225371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |