| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 248296 = | 200 (0.420) | 28 (0.070) | 13/96 | NT | 12.2% | coding (912/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | 248360 = | 231 (0.570) | coding (976/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 135 total aligned reads displayed.
CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/248369‑248296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGG > CP009273/248360‑248426 CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:35623762/1‑67CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAG > 1:21253235/1‑67 cCCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:29451761/2‑68 ACCGCGCCCGCCGCGGCGTTCATCCCCGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:33143389/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGGTCAGCTTTATTCAGCC > 1:18377867/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGCTCAGCTTTATTCCGCC > 1:36265754/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:39080297/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:30872761/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:32885465/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:4360430/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:28759110/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:5058543/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:26097129/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:6172065/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:21352476/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:3412875/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:19903894/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:9120560/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:19124587/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:1912031/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:9794345/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:18363306/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:14699259/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:14166616/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:13680442/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:16678623/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:16854252/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:12176964/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:17170371/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:12828198/1‑68 ACCGCGCCCGCCGCGGCGTTCATCCCAGG‑TTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:38348053/1‑67 ACCGCGCCCGCCGCGGCGTTCATCACAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTGATTCAGCC > 1:35348793/1‑68 ACCGCGCCCGCCGCGGCGGTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCCGCC > 1:1335462/1‑68 ACCGCGCCCGCCGCGGCGGTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:635852/1‑68 ACCGCGCCCACCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:35597733/1‑68 CCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCC > 1:30548537/1‑67 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC > 1:32875763/1‑68 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC < 1:33482650/68‑1 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC > 1:12105282/1‑68 CGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGC > 1:23580831/1‑68 CGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCG > 1:25634676/1‑67 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC < 1:13064759/68‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC < 1:13112878/68‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:22532310/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:6811496/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:26283485/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:388770/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:4485475/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:15674320/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:16893726/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:9232642/67‑1 GCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGG < 1:17282967/67‑1 CCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCCGCCGCGGC > 1:31898842/1‑67 CGCCGCGGCGTTCATCCCAGGTTTTCCGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGG < 1:33310923/68‑1 CGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGG < 1:6727987/68‑1 CGCCGCGGCGTGCATCCCTGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCTGCCGCGGCGGG < 1:4227852/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:9304591/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:13722935/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:22088431/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:38893268/68‑1 GGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:27252746/68‑1 GGCGTGCATCCAAGGTTTTACCCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGT < 1:18325414/68‑1 CGTTCATCCCAGGTTTTACGCGCGGGGGCGATTAGATCAGCTTTATTCCGCCGCGGCGGGCGCGGTG < 1:7706641/67‑1 GTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTG < 1:33997828/68‑1 GTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTG < 1:36257059/68‑1 TCATCCCCGGTTTTACGCGCGGTGGCGATCAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGC < 1:21832132/67‑1 TCATCCCAGGTTTTCCCCGCGGTGGCGATTAGATCAGCTTTACTCCGCCGCGGCGGGCGCGGTGTGCG < 1:24758240/68‑1 TCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCG < 1:24798595/68‑1 CATCCCCGGTTTTCCGCGCGGTGGCGATTAGATCCGCGTTATTCAGCCGCGGCGGGCGCGGTGTGCGT < 1:10976528/68‑1 TTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGG < 1:35097771/66‑1 TTTCCGCGCGGTGGCGATTCGACCCGCTTTATTCCCCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGG < 1:6154719/67‑1 cCGCGCGGTGGCGATTCGATCAGCTTTATGCCGCCGCGGCGGGCGCGGTGTGCGTCGGGTGGGGCTGC < 1:1481279/67‑1 ACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGC < 1:3184111/68‑1 CGCGCGGTGGCGATTAGATCAGCTTTATTCCGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCA < 1:30527839/68‑1 gGGCGATTCGACCACCTTTAACCAGCCCCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGAC < 1:35791133/66‑1 TTTATTCAGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCA < 1:35862016/66‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:38535522/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:10948022/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:37666468/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:10220303/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:23844902/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:34210449/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:3255292/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:24445162/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:32261794/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGA < 1:31467028/68‑1 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAG > 1:27451048/1‑67 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAG > 1:36506649/1‑67 GCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAG > 1:35181909/1‑67 cggGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:2813396/65‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTTGGGCTGCATGTGACTTTGCTTGACCCGCAAATGGAAAGACA < 1:38239300/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:22076783/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA < 1:19253971/68‑1 CGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGAC < 1:19750093/67‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT < 1:32280677/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT < 1:24121340/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACT < 1:19772539/68‑1 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA > 1:29240509/1‑65 GGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACA > 1:22374964/1‑65 GCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTG > 1:22678371/1‑68 CACCGCGCCCGCCGCGGCGTTCATCCCAGGTTTTACGCGCGGTGGCGATTAGATCAGCTTTATTCAGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/248369‑248296‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcggcGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGG > CP009273/248360‑248426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |