| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 438 (0.930) | 53 (0.140) | 15/90 | NT | 11.4% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 473 (1.250) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 231 total aligned reads displayed.
TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 TAACGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:5746805/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC < 1:842038/68‑1TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCGGAAGATAGCCAGCAGGATC < 1:8535312/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:15898152/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:7509726/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT < 1:5330105/68‑1 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:9655416/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:19884755/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:21692247/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:27558668/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:15325908/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:15128100/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:30563644/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:31580030/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:33031248/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:36375610/1‑65 AGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATC > 1:11523762/1‑65 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:23516319/1‑67 GCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCT > 1:22473731/1‑67 aacTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATCGCCAGCAGGATCGCTGCGCC < 1:19392705/64‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:25525658/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:8985287/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:10259268/67‑1 AAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCC < 1:12443257/67‑1 AGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGT > 1:27140217/1‑68 AGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGT > 1:14225562/1‑68 GCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTA > 1:14710576/1‑68 ATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAA > 1:35922241/1‑67 GCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCGACTGTGCGGTAACCGGg > 1:6848032/1‑67 CCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTG > 1:29228793/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:19614667/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:25252706/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:20779576/1‑68 ACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAG > 1:20556845/1‑68 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTT > 1:33925577/1‑68 AGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGGGAGCGGCTACGGTGCGGTACCCGGTGAGT > 1:18920793/1‑67 GCTGAAGATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCG > 1:23714242/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:3571169/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:13747203/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:26938477/1‑68 GATAGCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:10211168/1‑68 GCCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:26443545/1‑68 CCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTGACCGGTGAGTTCGATAGCGGCGCA > 1:7638471/1‑68 CCAGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA > 1:4985122/1‑68 AGCAGGATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC > 1:28124290/1‑68 AGGATCGCTGCGCCGCCGGGGATCGGCGACGGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGA > 1:10337584/1‑67 ATCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGAT > 1:36750044/1‑65 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGa > 1:16474720/1‑67 CGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:17004528/1‑66 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCTCCT > 1:7403804/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:32449749/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:6015174/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:5404174/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:13035705/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:22298780/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:32038040/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:32420959/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:2908991/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:36034850/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:34246448/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:30022494/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:6984443/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:28796145/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:15677562/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:27039707/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:8447963/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:25858634/1‑65 GCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:2514738/1‑65 GCTGCGCCGCCGGGGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCT > 1:11001500/1‑65 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCTCCTGCTG > 1:30861828/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:7029677/1‑67 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG < 1:19654338/67‑1 TGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:28349403/1‑67 GCGCCGCGGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:209216/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:38874617/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGC < 1:485/68‑1 GCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTG > 1:30184364/1‑66 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:20256837/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:34592350/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:22238718/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:30221089/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:33950735/1‑68 GCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCAATGATGCTGGCTA > 1:8765563/1‑68 CCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:33349412/1‑67 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:24477485/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:10728366/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:19935812/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26051133/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:26450404/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:24804221/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:29532454/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:18209062/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:14845613/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:36337/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:20953484/68‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTAT < 1:33492415/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTA > 1:11712652/1‑66 CGCCGGTGAGCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATC < 1:17324792/68‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT > 1:24051177/1‑68 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT > 1:17455544/1‑68 TAAAGCGGAAAATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/442606‑442683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgccgcCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCT < CP009273/442722‑442657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |