| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 438 (0.930) | 53 (0.140) | 15/90 | NT | 11.4% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 473 (1.250) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 949 total aligned reads displayed.
AATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442616‑442749 | tagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTGcgccgc > 1:9693623‑M1/58‑68 (MQ=255)tagcctgtacatgaaacgccactctgtctacggcacgttgattggttcgctctccggCGCTGcgccgc > 1:37741042‑M1/58‑68 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:11019881/68‑1 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt < 1:23724412/68‑1 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCt > 1:16218194/1‑68 (MQ=255) aTGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGAGCGCTGCGCCGCt < 1:26035485/68‑1 (MQ=255) ggCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTa > 1:15651723/1‑67 (MQ=255) gATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGa < 1:37249749/68‑1 (MQ=255) tGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAAc < 1:26324479/68‑1 (MQ=255) tGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAAc < 1:13607294/68‑1 (MQ=255) ggCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACt < 1:19604655/68‑1 (MQ=255) ggAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg > 1:672407/1‑68 (MQ=255) ggAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg > 1:32171849/1‑68 (MQ=255) ggAGTGAGGCATCGGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCgg > 1:8753960/1‑68 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGt > 1:2312433/1‑68 (MQ=255) gAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGt > 1:35317639/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgt > 1:14225562‑M1/1‑51 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:21620198/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:2215446/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:36760450/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:4344482/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:25854464/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:12095860/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt > 1:8095622/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCCGtt > 1:24071690/1‑68 (MQ=255) aGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCAACgggt > 1:21444202/1‑66 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:17224026/67‑1 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:28233092/67‑1 (MQ=255) gTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGtt < 1:15187771/67‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:10031878/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:29773464/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAcc < 1:39124316/68‑1 (MQ=255) gAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTAc < 1:897522/67‑1 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:16985892/1‑68 (MQ=255) ggCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:2263352/1‑68 (MQ=255) gCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggta > 1:6993492‑M1/1‑45 (MQ=255) gCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGc > 1:34434137/1‑67 (MQ=255) gCATATGCCACAGGCTGAAGATAGCCAGCAGGATCGCTCCGCCGCTATCGAACTCACCGGTTACCGc > 1:35838238/1‑67 (MQ=255) ctacggcacgttgattggttcgctctccggCGCTGCGCCGCTATCGCACTCCCCGGTTGCCGCCCAg < 1:30500242‑M1/37‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:18675427/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:25439378/68‑1 (MQ=255) cTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGt < 1:26472972/68‑1 (MQ=255) ccACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGATCTCGCCGGTTACCGCACAGTAg > 1:20549695/1‑67 (MQ=255) gcacgttgattggttcgctctccggCGCTGCGCCGCTTTCGACCTCCCCGGTTACCGCACGGGAGCCg < 1:38633111‑M1/43‑1 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgag > 1:20779576‑M1/1‑36 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:18157178/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:35525084/1‑68 (MQ=255) acaGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCg > 1:13835416/1‑68 (MQ=255) gCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATc > 1:10740360/1‑67 (MQ=255) gCTGAAGATAGCCACCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGAACAGTAGCCGATc > 1:7817324/1‑67 (MQ=255) cTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGAt < 1:2771954/65‑1 (MQ=255) cTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCa < 1:15870177/67‑1 (MQ=255) aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc < 1:29154893‑M2/68‑3 (MQ=255) aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc < 1:31556127‑M2/68‑3 (MQ=255) aGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgc < 1:7466182‑M2/68‑3 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcg > 1:26938477‑M1/1‑26 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:23545692‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:19044307‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:32439779‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:29532454‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:19935812‑M2/68‑4 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcgg > 1:33303435‑M2/1‑64 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:32879751‑M2/67‑4 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:33492415‑M2/67‑4 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggc < 1:12707959‑M1/68‑45 (MQ=255) gCCAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgc > 1:252362‑M1/1‑22 (MQ=255) ccAGCAGGATCGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgca > 1:4985122‑M1/1‑21 (MQ=255) ccAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca < 1:36338755‑M2/68‑9 (MQ=255) cagcagGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca > 1:30235564‑M2/1‑59 (MQ=255) cagcagGATCGCGGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca > 1:19715582‑M2/1‑59 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:14781779‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:22298780‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:13035705‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:8447963‑M2/1‑55 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:1172962/65‑1 (MQ=255) tCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACCGTCGCCGATCCCCGgcggcgcagcgatcct > 1:10337584‑M2/1‑51 (MQ=255) cGCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:20972242‑M1/1‑11 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:11463030‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:17602988‑M1/1‑68 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:5625405‑M1/1‑10 (MQ=255) gCTGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcct > 1:6015174‑M1/1‑10 (MQ=255) GCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:31344230‑M1/67‑1 (MQ=255) GCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga < 1:24791803‑M1/67‑1 (MQ=255) tGCGCCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgctcctgctg > 1:30861828‑M1/1‑8 (MQ=255) tGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctg > 1:512586‑M2/1‑47 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCg < 1:34180739‑M1/68‑1 (MQ=255) gcgcCGCcggtgatcggctactgtgcggtaatcggtgagttcgatagcggcgcagcgatcctgctggc < 1:7292667‑M1/68‑62 (MQ=255) gcgcCGCcggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggc < 1:33947048‑M1/68‑62 (MQ=255) GCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGa > 1:4740778‑M1/1‑68 (MQ=255) gccgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggcta > 1:27287021‑M1/1‑5 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCgac < 1:38219098‑M1/67‑2 (MQ=255) GCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGaa < 1:16724550‑M1/67‑1 (MQ=255) cgccggtgatcggctagtgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:36039194‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:17369530‑M1/68‑66 (MQ=255) cgccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatc < 1:24477485‑M1/68‑66 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAAcc > 1:28748972‑M1/1‑67 (MQ=255) gccggtgatcggctactgtgcggtaaccggtgagttcgatagcggcgcagcgatcctgctggctatct < 1:30127636‑M1/68‑67 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:31877384‑M1/1‑68 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:2896878‑M1/1‑68 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:27925506‑M1/1‑68 (MQ=255) | AATGGCGATGGCATAGGAGTGAGGCATCTGCCACAGGCTGAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAA > CP009273/442616‑442749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |