| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 340 (0.720) | 22 (0.060) | 10/94 | NT | 7.4% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 264 (0.670) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 CCGGATTATCTGTTTGCTGTTATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTAC < 1:32328021/68‑1CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTA > 1:6607249/1‑67 GGATTATCTGTTTTCTGATATCGTCTGTACTGGCGGTGACTGCAGCAACAGTATCAATATTTCTACCt < 1:14857380/68‑2 GGATTATCTGTTTGCTGATCTCGTCGGTACTGGCGGGGACGGCAGCAACAGTATCAATATTTCTACCG < 1:35068221/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:10333648/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:3840568/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:17147443/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:30968611/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:28728395/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:11543496/68‑1 GGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCG < 1:6720182/68‑1 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:38864517/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:5672786/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:14736042/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:38822218/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC > 1:19450716/1‑68 ATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC < 1:25716579/67‑1 TTATCTTTTTGCTGCTATCGGCGGTACTGGCGGCGACGGCAGCAAGAGTATCAATATTTCTACCGCC < 1:38693348/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:12928231/67‑1 TTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCC < 1:10923876/67‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:35235290/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:37949821/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:32733992/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:9708147/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:4059154/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:26803720/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:25835422/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:7436429/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:2371927/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:22242938/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:12435942/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:20500496/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:19914779/68‑1 ATCTGTTTGCTGATATCGTCGGTACTGGCGGTAACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:29013401/68‑1 ATCTGTTTGATGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT < 1:29034657/68‑1 TCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT > 1:28538679/1‑67 CTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTAC < 1:12777194/68‑1 CTGTATGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTAC < 1:12547913/68‑1 TTGCTGATATCTTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:19298338/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:17778396/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:49160/67‑1 TTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGA < 1:2309016/67‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:18076617/68‑1 TGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACG < 1:35419568/68‑1 GCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGA < 1:31878732/68‑1 TGATAGCGTCGGGACTGGCGGTGCCGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGAT < 1:26193028/67‑1 ATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAG < 1:19039333/68‑1 ATCGCCGGTCCTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAG < 1:32128284/68‑1 CGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCA < 1:10804283/68‑1 GTCGGTCCTGGCGGTGACGGCAGCCACAGAATCAATATTTCTACCGCCAGTACCGACGATATCAGCAA < 1:37141150/68‑1 gcTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCCACCGCCAGTACCGACGATATCAGCAAACA < 1:2936111/66‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:24825622/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:3749004/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:36103182/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:29758201/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:25212456/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:35207307/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTATCAAAATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:19399875/68‑1 GGTACTGGCGGTGACGGCAGCAACAGTACCAATATTTCTCCCGCCAGTACCGACGATATCAGCAAACA < 1:36227557/68‑1 GGTACTGGCGGTGACGGCAGCAACAGAATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACA < 1:31313544/68‑1 TACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAG < 1:17147608/67‑1 ACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:209740/67‑1 ACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGC > 1:17490963/1‑41 ACTGGCGGTGACGGCAGCAACAGTATCAATATTCCTACCGCCAGTACCGACGATATCAGCAAACAGA < 1:22468568/67‑1 GCAACAGTATCAATATTTCTACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGA > 1:16694734/1‑67 CCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTA > 1:11075520/1‑67 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC > 1:5982301/1‑67 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC > 1:30449499/1‑67 GCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGC > 1:17209069/1‑67 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGACCGGCGCTGCGTTTTCCAGTAGCGC > 1:4071105/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:6266729/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:6581436/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:21276948/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:10711038/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:34970542/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:18675290/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:31803276/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:2682515/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:19490683/1‑68 CCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTATCCAGTAGatc > 1:32889316/1‑65 CCAGTACCGACGATATCAGCAAACAGATAATCCGAGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGC > 1:38061089/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:5306572/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:30493752/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:12228651/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:9415650/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > 1:19934456/1‑68 TACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGGTTTCCAGTAGCGCGGTT > 1:38211047/1‑68 CCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1314837‑1314763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314808‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |