| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 340 (0.720) | 22 (0.060) | 10/94 | NT | 7.4% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 264 (0.670) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 426 total aligned reads displayed.
ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 | ctgtttgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtAc < 1:12777194‑M2/2‑1 (MQ=255)ctgtatgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtAc < 1:12547913‑M2/2‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:24825622‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:29758201‑M1/48‑1 (MQ=255) caGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc > 1:19803877/1‑68 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:20520214/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:11681860/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:25074735/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:13130371/1‑67 (MQ=255) tgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:10804283‑M1/52‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATTCTGTTGCTGCCGTCACCGCCAGTACcgt < 1:29945988/66‑2 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:31447277/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:25797986/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:34309221/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:17659219/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:4299976/66‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:29465629/67‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:11456460/67‑1 (MQ=255) ctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGGACCGGCGat < 1:32128284‑M1/54‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:27894289/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:8160007/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:3720439/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:21787636/67‑1 (MQ=255) tcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:31878732‑M1/60‑1 (MQ=255) cgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:18076617‑M1/61‑1 (MQ=255) cgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:35419568‑M1/61‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:19452821/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:10512224/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:4928522/68‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:25212456‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:3749004‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaaaatttctaccgccagtACCGACGATATCAGCAAACa < 1:19399875‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtaccaatatttctcccgccagtACCGACGATATCAGCAAACa < 1:36227557‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:29254518/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:28731055/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:33651618/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:27110534/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:8366656/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:36052626/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:18821171/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:36535228/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:23889990/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:5961905/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:4115166/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAg < 1:38206068/68‑1 (MQ=255) tactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACAg < 1:17147608‑M2/21‑1 (MQ=255) actggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACAGa < 1:209740‑M2/22‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTTACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:29013401‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:28538679‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:22242938‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:26803720‑M1/68‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt > 1:38864517‑M1/1‑68 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCCCCGCCAGTACCGACGAGATCAGCAAACAGATAATcc < 1:35068221‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:3840568‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:30968611‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:6720182‑M1/68‑1 (MQ=255) aGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCggg < 1:31205712/67‑1 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:1613730/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:3522591/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:1511265/1‑67 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgcg < 1:24309152/66‑1 (MQ=255) atatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCgg < 1:9156617/68‑1 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:17595228/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:32556367/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCgg > 1:6580494/1‑67 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAAAATCCGGGCGCggg > 1:2620504/1‑68 (MQ=255) gcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGa > 1:16694734‑M2/30‑67 (MQ=255) tGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAc > 1:5598390/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:14855213/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:33013507/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:38710590/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:25895653/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:236076/1‑68 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:39074571/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:34524097/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:5331286/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:11994247/1‑67 (MQ=255) tGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:20779541/1‑65 (MQ=255) ttGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc > 1:18492528/1‑68 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:10069002/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:23210960/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:37864587/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:27730595/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:6151771/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:13371493/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:3232787/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:21554152/67‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:28308310/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:3672463/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:11071675/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:19016837/1‑67 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:23009484/1‑67 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:21276948‑M2/6‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:19934456‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:12228651‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:9415650‑M2/2‑68 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:31745072/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:19290655/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:7865696/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:4772142/66‑1 (MQ=255) | ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |