| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2436008 | 365 (0.770) | 22 (0.060) | 8/94 | NT | 6.8% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | = 2436093 | 296 (0.750) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 101 total aligned reads displayed.
GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < CP009273/2436093‑2436029 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:4457722/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:3433123/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:32145644/1‑67GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCC > 1:15366977/1‑67 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:19183266/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:7923275/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:5704492/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:20660332/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:28222316/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15410503/1‑68 GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:26856949/1‑68 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGCCATTACCGCTCCCCTGCTCCGC > 1:6151573/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:28571971/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:22244977/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:22934189/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:26506339/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:27798375/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:10954083/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:31021225/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:33652996/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:37087744/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:8391216/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:12169778/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:12033583/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:15055440/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:11574519/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:16415809/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:10039964/1‑67 GCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACAATACCGCTCCCCTGCTCCGC > 1:7725641/1‑67 CTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCG < 1:32174186/67‑1 CTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCG > 1:23039271/1‑67 CTTGGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCG < 1:5523229/67‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:32452055/68‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:13654250/68‑1 TTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCC < 1:30576455/68‑1 GGGCGCAAACGGGAAATCCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGgg < 1:67152/68‑3 AACAGACATTACCGCTCCCCTGCTCCGCGGCGTAATAGCGCCAGCGCCCACACCGCGCTGGCAGTAC > 1:26031752/1‑67 AACAGACATTACCGCTCCCCTGCTCCGCGCCGTCATAGCGCCGGCGACAACTACGCGCTGGCTATcc > 1:16898079/1‑65 ACATTACCGCTCCCCTGCTCCGCGCCGTCATAGCGCCAGCGACAGCACCGCGCTGGCAATACCCCCG > 1:5417873/1‑67 CATTACCGCTCCCCTGCTCCGCGCCGTACTAGCGCCAGCGACAACACCGCGCTGGCAATACCACCGCC > 1:18947937/1‑68 CATTACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAGCAACGCGCTGGCATTACCCCCGCg > 1:19365276/1‑67 ACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCGGCGACAACAACGCGCTGGCAAGACCACCGCCGAga > 1:26562717/1‑66 ACCGCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGACAACAACGCGCTGGCAATACCCCCGCCGctt > 1:11058846/1‑65 CCGCTCCCCTGCTCCGCGCCGTTATAGCGCCCGCGACAACACCGCGCTGGCGATACCACCGGCGct > 1:3754616/1‑64 CCGCTCCCCTGCTCCGCGCCGTATTAGCGCGGGCGACAACAACGCGCTGGCGATACCACCGGCGATAA > 1:4015485/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGGCAACAACGCGCTGGCAATACCCCCGCGGATta > 1:32542927/1‑66 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGACAACAACGCGCTGGCAGTCCCACCGGCGATAA > 1:30757073/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACACCGCGCTGGGAATACCGCCGCCGAGAA > 1:4381683/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTGGCAGTCCCCCCGCCGATAA > 1:16244562/1‑68 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATca > 1:92384/1‑66 CCGCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAA > 1:26548030/1‑68 CGCTCCCCTGCTCCGCGCCGTAATAGCGCCCGCGACAACAACGCGCTGGCAATACCCGCGGCGATAA > 1:436078/1‑67 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGATACTC > 1:37141857/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACCCCGCGCTGGCAATACCCCCGCCGATAATC > 1:12598670/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACACCGCGCTGGCAGTACCCCCCCCGGTCATC > 1:864506/1‑68 GCTCCCCTGCTCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATC > 1:13237993/1‑68 TCCCCTGCTCCGCGCCGTAATAGCGCCAGCGCCAACACCGCGCGGGCAATACGACCGCCGCTAATCG > 1:23935500/1‑67 CCTGCTCCGCGCCGTAATAGCGCCCGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCC > 1:1826347/1‑66 GCTCCGCGCCGTAATAGCGCCAGCGCCAACAACGCGCTGGCAATTCCACCGCCGCTAATCGCCGCTT > 1:36921268/1‑67 GCTCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTGGCAATACCACCGCCGATAATCGCCGCgt > 1:6630001/1‑65 TCCGCGCCGTAATAGCGCCAGCGACAACCACGCGCTGGCAATACCACCGCCGATATTCGCCGCGTCCC > 1:848274/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTTGCAATACCACCGCCGATAATCGCCGCTTACC > 1:8732445/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATTATCGCCGCTTCCC > 1:31505463/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:4091333/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:33799430/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:4010409/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:1185371/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:23629398/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:27411998/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:32620655/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:3243990/1‑68 TCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:28436480/1‑68 TCCGCGCCGGAATAGCGCCAGCGCCAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCC > 1:8462008/1‑68 CCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG > 1:6136109/1‑68 CGCGCCGTAATAGCGCCAGCGACAACAACGGGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:17171312/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGa > 1:3043136/1‑67 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:5456265/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:5907864/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:22562165/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGT < 1:12375326/68‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCG < 1:4902438/67‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:31292679/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:5552373/65‑1 CGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCC < 1:18360306/65‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT < 1:28696023/67‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:28024947/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT < 1:26769602/67‑1 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:24023838/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTT > 1:35033094/1‑67 GCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTGCCCGTTT > 1:23103225/1‑67 CGTAATAGCGCCAGCGAGAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:7371181/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:37543677/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:9129419/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:15304554/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < 1:4276932/68‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:26545321/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:33357437/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:38994705/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:34559825/67‑1 CGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGC < 1:9275980/67‑1 GGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2435935‑2436008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgtAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCT < CP009273/2436093‑2436029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |