| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2436008 | 365 (0.770) | 22 (0.060) | 8/94 | NT | 6.8% | coding (766/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | = 2436093 | 296 (0.750) | coding (851/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 394 total aligned reads displayed.
AGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAA > CP009273/2436026‑2436159 | gcaAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacg < 1:34559825‑M2/67‑4 (MQ=255) aaaCGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggc > 1:28024947‑M2/1‑62 (MQ=255) aaaCGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggc < 1:28696023‑M2/67‑6 (MQ=255) aaaCGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggc > 1:24023838‑M2/1‑62 (MQ=255) aaaCGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggc < 1:26769602‑M2/67‑6 (MQ=255) cGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcgg > 1:6136109‑M2/1‑59 (MQ=255) cGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCCCGTTGTTGTCGCTGGCGCTATTacggcgcg < 1:17171312‑M2/67‑9 (MQ=255) ggtAAGCGGCGATTATCGGCGGTGGTATTGCAAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcgga > 1:8732445‑M2/1‑58 (MQ=255) gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcgga > 1:4091333‑M2/1‑58 (MQ=255) gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:34123989/68‑1 (MQ=255) gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:32201597/68‑1 (MQ=255) gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:29059253/68‑1 (MQ=255) ggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcg < 1:5552373‑M2/65‑9 (MQ=255) aGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTgg < 1:28393284/67‑1 (MQ=255) cggcgATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAg > 1:11394830/1‑68 (MQ=255) ggcgATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAgg < 1:20869771/68‑1 (MQ=255) ggcgATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAg < 1:37795051/67‑1 (MQ=255) gATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcggagcaggggagc > 1:13237993‑M2/1‑48 (MQ=255) gATTATCGGCGGGGGTATTGCCAGCGCGGGGTTGTCGCTGGCGCTATTacggcgcggagcaggggagc > 1:12598670‑M2/1‑48 (MQ=255) ttATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcggagcaggggagcgg > 1:26548030‑M2/1‑46 (MQ=255) ttATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAAc < 1:2727748/67‑1 (MQ=255) ttATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAAc < 1:12870887/67‑1 (MQ=255) ttATCGCCGGTGGGACTGCCAGCGCGTTGTTGTCGCGGGCGCTATTacggcgcggagcaggggagcgg > 1:30757073‑M2/1‑46 (MQ=255) ttATCGCCGCGGGTATTGCCAGCGCGTTGTTGTCGCGGGCGCTATTacggcgcggagcaggggagcg > 1:436078‑M2/1‑46 (MQ=255) tgatcGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTacggcgcggagcaggggagcgg > 1:92384‑M2/3‑46 (MQ=255) taatcCGCGGGGGTATTGCCAGCGCGTTGTTGCCGCGGGCGCTATTacggcgcggagcaggggagcgg > 1:32542927‑M2/3‑46 (MQ=255) tATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGc < 1:16561460/68‑1 (MQ=255) tATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGc < 1:19645008/68‑1 (MQ=255) agcgccggtgGTATCGCCAGCGCGGTGTTGTCGCGGGCGCTATAacggcgcggagcaggggagcgg > 1:3754616‑M2/3‑44 (MQ=255) cgcgggGGTAATGCCAGCGCGTTGCTGTCGCTGGCGCTATTacggcgcggagcaggggagcggtaatg > 1:19365276‑M2/2‑41 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:10157656/1‑68 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:24568404/1‑68 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:21542381/1‑68 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:5044300/1‑68 (MQ=255) cggGGGTATTGCCAGCGCGGTGCTGTCGCTGGCGCTATGacggcgcggagcaggggagcggtaatgt > 1:5417873‑M2/1‑39 (MQ=255) gtggtATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTgc > 1:15809742/1‑68 (MQ=255) tATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCgg > 1:19117497/1‑68 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:31186680/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:32829592/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:10509222/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:22865962/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:12313376/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:18343639/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:15343921/68‑1 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:2198042/1‑68 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:37090586/1‑68 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:25820769/1‑68 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:14560576/1‑68 (MQ=255) cgCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:18763450/2‑68 (MQ=255) ccAGGGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTCCGCGGATGAg > 1:27625912/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:33190262/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:10967710/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:35194662/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:15108232/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:15477758/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:7059553/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:18029082/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:4804308/1‑68 (MQ=255) cAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:11805255/1‑67 (MQ=255) gcgcGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGc > 1:14017175/1‑67 (MQ=255) gcgcGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGc > 1:31539694/1‑67 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGATGcc < 1:8582863/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGccc > 1:17377608/1‑67 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:8394823/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:6362473/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:3661110/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:5290905/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:3969776/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:26353126/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:12010988/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:16026930/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:22335404/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:22616870/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:23742740/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:24357104/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTAATACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:9449044/66‑1 (MQ=255) gcgTTGTTGTCGCAGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTATATTGCGCGGATGAGGcc < 1:18958176/66‑1 (MQ=255) gcgTTGTGGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:38869902/66‑1 (MQ=255) gcgGTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:20356185/66‑1 (MQ=255) cgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGccccc > 1:16810739/1‑68 (MQ=255) gttgttGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCg < 1:36840586/68‑1 (MQ=255) tgttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc < 1:12971228/67‑1 (MQ=255) tgttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc < 1:25184692/67‑1 (MQ=255) tgttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc > 1:23511631/1‑67 (MQ=255) tgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTg > 1:35541840/1‑68 (MQ=255) gtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTgg < 1:23239076/68‑1 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTggg < 1:13628714/67‑1 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:1766224/1‑68 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:7341831/1‑68 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:17822792/1‑68 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:26100746/1‑68 (MQ=255) cGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGACCCCGCACTGGGt > 1:31993929/1‑68 (MQ=255) gCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTg < 1:38526902/68‑1 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:23105031/1‑66 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:895269/1‑66 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:33849549/1‑66 (MQ=255) tGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGc < 1:30237082/67‑1 (MQ=255) tACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCaa > 1:6639557/1‑67 (MQ=255) tACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCaa > 1:19913082/1‑67 (MQ=255) tACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCaa > 1:30629770/1‑67 (MQ=255) | AGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAA > CP009273/2436026‑2436159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |