BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2845465 =	326 (0.690)	26 (0.060)	12/96	NT	7.5%	coding (243/273 nt)	hypC	hydrogenase maturation protein
*	?	CP009273	2845525 =	366 (0.910)	26 (0.060)	12/96	NT	7.5%	coding (31/1122 nt)	hypD	hydrogenase maturation protein

Only 100 of 104 total aligned reads displayed.

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2845537‑2845465

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG  >  CP009273/2845525‑2845588

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATAGAACAGC                                                                        >  1:5469575/1‑67

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC                                                                        >  1:8912613/1‑67

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC                                                                        >  1:33945461/1‑67

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC                                                                        >  1:4902813/1‑67

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC                                                                        >  1:15999268/1‑67

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGC                                                                        >  1:12496206/1‑67

GCATCACCTGTTCCG‑‑GCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:7631180/68‑1

  aaCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:24665862/66‑1

  ATCACCTGTTCCGGCGCGCTATATTCATCAACAAAACGAATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:1586335/68‑1

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:25093927/68‑1

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:7469415/68‑1

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:5736724/68‑1

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     <  1:33661942/68‑1

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC                                                                      >  1:2998140/1‑67

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC                                                                      >  1:30625111/1‑67

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC                                                                      >  1:18586046/1‑67

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGC                                                                      >  1:4999260/1‑67

  ATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCCCCATACAACAGCGC                                                                      >  1:1224760/1‑67

   TCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGC                                                                    <  1:1500098/68‑1

   TCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCG                                                                     >  1:25305351/1‑67

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:25232217/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:15468772/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:10946038/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:14809300/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:21499009/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:14169193/68‑1

    CACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:2057342/68‑1

    CACCTGTTCCGGAGCGAGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCC                                                                   <  1:17873677/68‑1

     ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:16610112/1‑68

     ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:36169720/1‑68

     ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:2343670/1‑68

     ACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:34897164/1‑68

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:1288402/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:30672495/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:22586848/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:22423777/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:32817953/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:6598082/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:18303613/68‑1

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:12209657/1‑67

      CCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG                                                                  >  1:11211098/1‑67

      CCTGTTCCGGCGCGCGATATTCATAAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:35218309/68‑1

      CCTGTCCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGG                                                                 <  1:7173066/68‑1

       CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACCGCGCGCCGcc                                                                >  1:15645027/1‑66

       CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA                                                                <  1:26664686/68‑1

       CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA                                                                <  1:32550257/68‑1

       CTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA                                                                <  1:36555019/68‑1

       CTGATCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGA                                                                <  1:13859583/68‑1

           TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG                                                            <  1:9876525/68‑1

           TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG                                                            <  1:5436476/68‑1

           TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAG                                                            <  1:1081206/68‑1

           TCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACA                                                             <  1:28690055/67‑1

             CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGT                                                          <  1:20551010/68‑1

             CGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGT                                                          <  1:3874480/68‑1

              GGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTG                                                         >  1:13559601/1‑68

                   GCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGC                                                     <  1:31342667/67‑1

                     GATCTTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:7232548/67‑1

                     GATATTCATCAACAAAACTCATTATTTTTCCTCGCCAAACAACACCGCGCCGGAACAGGTGATGCAG                                                   <  1:20448558/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACCACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:34496389/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:38703871/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:11305166/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:4064043/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:20115960/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:35015959/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:12508968/67‑1

                     GATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:20155107/67‑1

                     GATATTCATCAACAAAACCCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAG                                                   <  1:8421527/67‑1

                       TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTA                                                <  1:22648903/68‑1

                       TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTT                                                 <  1:37257992/67‑1

                       TATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCCCGCCGGAACAGGTGATGCAGTT                                                 <  1:10071159/67‑1

                        ATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAA                                               <  1:30884001/68‑1

                          TCATCAACAAACCGCATTATTTTTCCTCGCCAAACAACAGCGCGCCGGAACAGGTGATGCAGTTAATT                                             <  1:3734764/68‑1

                            ATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGA                                           <  1:9368789/68‑1

                              CAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGC                                         <  1:21649100/68‑1

                                ACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCA                                        >  1:6486501/1‑67

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      <  1:19024600/68‑1

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      <  1:12186487/68‑1

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:17407082/1‑68

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:4682882/1‑68

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      <  1:38926147/68‑1

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:36363175/1‑68

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      <  1:30919854/68‑1

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:20014789/1‑68

                                                                 GCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:33854874/1‑68

                                                                  CGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACC      >  1:28215279/1‑67

                                                                   GCGCCGGAACAGGTGATGCAGTTATTTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG     >  1:23311177/1‑67

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:15486515/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:15312157/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:35271012/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:20947081/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:32496403/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:4200369/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:29999123/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGC    <  1:28383165/68‑1

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG     >  1:17228115/1‑67

                                                                   GCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCG     >  1:28738946/1‑67

                                                                    CGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCC   >  1:8508588/1‑68

                                                                     GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTGTTACACCGCCG  >  1:11514068/1‑68

                                                                     GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG  <  1:23329826/68‑1

                                                                     GCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG  >  1:23383799/1‑68

GCATCACCTGTTCCGGCGCGCGATATTCATCAACAAAACGCATTATTTTTCCTCGCCATACAACAGCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2845537‑2845465

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCG  >  CP009273/2845525‑2845588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.